Gene Saro_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0852 
Symbol 
ID3915907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp902522 
End bp904303 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content66% 
IMG OID640443584 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_496131 
Protein GI87198874 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.278676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTC TTGGAAATCT CAAGATCAGG ACAATTTCGA TCGCCGGCAA CCTGCTTCTC 
GGCCTGGCGG CCGTGGGTGG CGGGATCGCT TCGGTGGTCG GCGTGGGGGC AATGAAGGAG
CAGGTCGTCT TCATCGACGA GAACACCGTT CCGAGCATCG CCCAGATCGG TGACGTTTCG
ATCGGCGTGA TGGAAGCGCG CTTCGCCATG TCGAAGCTCA TCCTCGCCTC GACGGATGTC
GCCCGGCAGG AGCAGGACGG CACGCTCAAC GAGAAGAAGG CGGCTGTCGA CAAGATGCTC
GAGGATTACC GCGCCAATAT ATCGGGCGAT GAAGAGCAGA AGCTGTTCGA CGCCGTCCTG
GCAAGCTGGG ACGACTGGAA GGCAACGGCT GGACCGATCC GCCAACTGGC GATGCAGGCC
CAGATCGATG AAGCGACGCT CAAGTTCAAT GACGAACTCG GCCCGCGCGG CGCGGCTCTG
GCAAAAGCGC TGGATGCGCT GAGGGACTTC AACGTCAAGC TTGGCGGCGA CGCCAGCGAT
GCGGCCGTCG CAGGTGCGAC AAGCACCCGC AGCCTCGCGA TGTCGGTCGC GGCCATTTCG
GCGTTGATCG CCTCGCTCGT CGTCTTCCTG ACCATTGTCC GCATTGCCCG TCCGGTCGCG
CAGCTGACCG CGGCGATGGA GGACATGGCT GGTGGCAACC TCGACCGCGA CGTGCCCTTC
CGCGACCAGC CCGACGAAGT CGGCGGCATC GGTCGCGCGC TGGAATCGAT CAAGGACAGC
ATTGCCCGCC GCACCCGCGA GGAAGCCGAG CAGCGCATGG AAATCCAGCA GCGCATGGTT
TCGGGCCTGG CACAGGGGCT TACCGCCCTT CGCGATGGTC GCCTGAACTG CCGCATCGAT
CAGGCCTTCC CCGAGGAGTA CGAAGGTCTG CGCCACGATT TCAACCAGAC GATCGAATCG
CTGGCGGCGC TCATCGCGCA GGTCGTGCAG GGTTCGGGCA ACGTCCGCAC CGGGGCGAGC
GAGATCGCCA GTGCTGCCGC GGATCTTTCG GGCCGCACCG AAAGCCAGGC CGCAGCGCTG
GAGGAATCGG CAGCAGCCGT CCGCCAGATC ACCGACTCGC TGCGTGAATC GGCCCATACC
GCCAGCGAAG CCAGCAGCGT TGCCGGCGAA GCCCGCCGCG ATGCCAGCGC CAGCGGCGAG
ATGATGGGCC GCGCCGTGAG CGCGATGGAG GAAATCGCCA AGTCGAGCGG CCGGATGGGC
GAGATCGTCT CGCTGATCGA GGGCATCGCC TTCCAGACCA ACCTGCTCGC GCTCAACGCC
GGCGTCGAAG CGGCCCGTGC GGGCGATGCC GGCAAGGGCT TTGCCGTCGT CGCCAGCGAA
GTCCGTGCGC TTGCCCAGCG TTCGGCCGAA GCCGCCAGCG AAATCACCGG CATCATCAAG
TCCAGCGAAC GCGAAGTGGG CGACGGTGTG CAGGTGATCG GCCAGACTCA GGAAGCGCTC
GACCAGATCG TCCGCCACAC TGCGCGCCTG TCGGACATGA TCGGAACGAT TGCCGAGGCG
ACCAGCCAGC AGTCGGCGGC GATCAGCCAG GTCAACACCG TCGTCGGCGA CATGGACCGC
ATCACCCAGC AGAACGCCGC GCTTGTCGAG GAATCGACCG CAGCCTCGCA GAACCTCGCC
AATGCGGCGG GCACCCTGTC GCAGCTGGTC GAGCGCTTCG ACCTGGGCGA CAGCCGTGGC
CGTGCCCCGG CACAGGCAGC CCCGCGCCGC CTGGCCGCCT GA
 
Protein sequence
MAFLGNLKIR TISIAGNLLL GLAAVGGGIA SVVGVGAMKE QVVFIDENTV PSIAQIGDVS 
IGVMEARFAM SKLILASTDV ARQEQDGTLN EKKAAVDKML EDYRANISGD EEQKLFDAVL
ASWDDWKATA GPIRQLAMQA QIDEATLKFN DELGPRGAAL AKALDALRDF NVKLGGDASD
AAVAGATSTR SLAMSVAAIS ALIASLVVFL TIVRIARPVA QLTAAMEDMA GGNLDRDVPF
RDQPDEVGGI GRALESIKDS IARRTREEAE QRMEIQQRMV SGLAQGLTAL RDGRLNCRID
QAFPEEYEGL RHDFNQTIES LAALIAQVVQ GSGNVRTGAS EIASAAADLS GRTESQAAAL
EESAAAVRQI TDSLRESAHT ASEASSVAGE ARRDASASGE MMGRAVSAME EIAKSSGRMG
EIVSLIEGIA FQTNLLALNA GVEAARAGDA GKGFAVVASE VRALAQRSAE AASEITGIIK
SSEREVGDGV QVIGQTQEAL DQIVRHTARL SDMIGTIAEA TSQQSAAISQ VNTVVGDMDR
ITQQNAALVE ESTAASQNLA NAAGTLSQLV ERFDLGDSRG RAPAQAAPRR LAA