Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0821 |
Symbol | |
ID | 3915875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 875100 |
End bp | 876857 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640443552 |
Product | acyl-CoA synthetase |
Protein accession | YP_496100 |
Protein GI | 87198843 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGTTT CGGACGCCGT CGCTGACAAG GCGACTCTCG TTCCCACGCC CAACCTCGAC GTGCAGACGC GTCGATATGC GGACTTCGAC ACCTTCTGCG ATGCACTCGA TTATGCCGCG AAGGGCGTCC TGGGCTTCAA CTTCCACGAC CCGCGCGGCA ACCTTGCCCG GGTCTATCCC TATTCCGAGC TGCGCGAGGA CGCGCTCGTG GCCGCGCGCA AGCTGATCGG CCTCGGCGTC CAGCCCGGAG ACCGGGTCGC GCTCGTGGCA GAGACGGGCC CCGATTTCGC GGCCATCTTC TGCGGTGCGA TGTATGCCGG CGCATGGCCG GTCCCGCTCC CGCTGCCGAC CAGCTTCGGC GGCAAGGAGA GCTACATCGA CCAGCTCGCG GTCCAGCTTT CCAGTTCAGA CCCGAAGATG CTCGTCTACC CCGGCGAAAT CGCCGAGATG GCCAGTGCCG CAGCCGCACG CCAGGGTTGC GCGGGCCTGT CGTGGGATGA ATTCCACGCC GGCGCAGCCG CCGATGGCCC GCTGCCCACG CCCGATCCGG ACGCGATCAG CTATCTCCAG TATTCGAGCG GGTCGACCCG CTTCCCGCAT GGCGTCGCCG TCACTCACCG CGCGCTCATG GCGAACCTCG CCGGCCATTC GCATGGCATG AAGATCGCGG ACCCCGATCG CGCGATCTCG TGGCTGCCCT GGTATCACGA CATGGGGCTC GTCGGCTGCT TCCTCTCGCC GATCGCCAAT GGCGTGTCGG TCGATTACCT CAAGACCGAG GACTTCGCCC GCCGCCCGCT CGCCTGGCTC GACCTGATCA GCCGCAACAC CGGCACGACA CTCTCCTATT CGCCCACCTT CGGCTACGAC ATCTGCGCCC GCCGCATCTC GAGCCAGAGC CACGTTTCCG ACCGCTTCGA CCTTTCGCGC TGGCGCGTCG CCGGCAACGG GGCCGACATG ATCCGCCCCG ACGTGATGCA GAACTTCGTC AACGCCTTTG CCGAGGCCGG GTTCAAGGCC GAAGCCTTCC TGCCCAGCTA CGGACTTGCC GAAGCGACGC TTGCCGTCAC CATCATGCCC CCGGGCGAAG GCATCCGCGT CGAACTGGTC GAGGAAGAAC GCCTCTCGGG CACCCCGCGC GACCTTTCGC GCCCGGCCCG CTACCGCGCC ATGGTCAACT GCGGCGTTCC CGTGCGCGGC ATGGAAGTCG CCATTCGTGG CGAGAACGGC AACGAGATCG GCCACCACCA CATCGGCAAG GTGTGGTGCC GCGGCTCATC GGTCATGCAC TCCTACTTCC GCGATCCCGA AGCGACCGAC GCCTGCATGG TCGACGGCTG GCTCGACACC GGCGACATGG GCTACGTCGA CGAGAACGGC TACCTGTTCA TCGTCGGCCG CGCCAAGGAC ATGATCATCA TCAACGGCAA GAACCACTGG CCCCAGGACA TCGAATGGGC GGTGGAGCAG CTTCCCGGCT TCCACCAGGG CGATATCGCC GCCTTCTCGG TCGAGACCGA GAACGGCGAG GAGGCGCCTG CCGTCCTCGT CCATTGCCGC GTCTCCGACC CGGTCGAACG GGTCAAGCTG CGCGACCAGA TCCGCGACAA GGTTCGCTCG ATCACCGGCA TGAACTGCGT CGTGGAACTC GTGCCGCCGC GCACCCTGCC GCGCACCAGC TCGGGCAAGC TGAGCCGGGC CAAGGCCAAG AAGCTCTACC TCACCGGCGA GATCGCGCCC TATCAGCTCG CAGCCTGA
|
Protein sequence | MTVSDAVADK ATLVPTPNLD VQTRRYADFD TFCDALDYAA KGVLGFNFHD PRGNLARVYP YSELREDALV AARKLIGLGV QPGDRVALVA ETGPDFAAIF CGAMYAGAWP VPLPLPTSFG GKESYIDQLA VQLSSSDPKM LVYPGEIAEM ASAAAARQGC AGLSWDEFHA GAAADGPLPT PDPDAISYLQ YSSGSTRFPH GVAVTHRALM ANLAGHSHGM KIADPDRAIS WLPWYHDMGL VGCFLSPIAN GVSVDYLKTE DFARRPLAWL DLISRNTGTT LSYSPTFGYD ICARRISSQS HVSDRFDLSR WRVAGNGADM IRPDVMQNFV NAFAEAGFKA EAFLPSYGLA EATLAVTIMP PGEGIRVELV EEERLSGTPR DLSRPARYRA MVNCGVPVRG MEVAIRGENG NEIGHHHIGK VWCRGSSVMH SYFRDPEATD ACMVDGWLDT GDMGYVDENG YLFIVGRAKD MIIINGKNHW PQDIEWAVEQ LPGFHQGDIA AFSVETENGE EAPAVLVHCR VSDPVERVKL RDQIRDKVRS ITGMNCVVEL VPPRTLPRTS SGKLSRAKAK KLYLTGEIAP YQLAA
|
| |