Gene Saro_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0821 
Symbol 
ID3915875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp875100 
End bp876857 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content67% 
IMG OID640443552 
Productacyl-CoA synthetase 
Protein accessionYP_496100 
Protein GI87198843 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTTT CGGACGCCGT CGCTGACAAG GCGACTCTCG TTCCCACGCC CAACCTCGAC 
GTGCAGACGC GTCGATATGC GGACTTCGAC ACCTTCTGCG ATGCACTCGA TTATGCCGCG
AAGGGCGTCC TGGGCTTCAA CTTCCACGAC CCGCGCGGCA ACCTTGCCCG GGTCTATCCC
TATTCCGAGC TGCGCGAGGA CGCGCTCGTG GCCGCGCGCA AGCTGATCGG CCTCGGCGTC
CAGCCCGGAG ACCGGGTCGC GCTCGTGGCA GAGACGGGCC CCGATTTCGC GGCCATCTTC
TGCGGTGCGA TGTATGCCGG CGCATGGCCG GTCCCGCTCC CGCTGCCGAC CAGCTTCGGC
GGCAAGGAGA GCTACATCGA CCAGCTCGCG GTCCAGCTTT CCAGTTCAGA CCCGAAGATG
CTCGTCTACC CCGGCGAAAT CGCCGAGATG GCCAGTGCCG CAGCCGCACG CCAGGGTTGC
GCGGGCCTGT CGTGGGATGA ATTCCACGCC GGCGCAGCCG CCGATGGCCC GCTGCCCACG
CCCGATCCGG ACGCGATCAG CTATCTCCAG TATTCGAGCG GGTCGACCCG CTTCCCGCAT
GGCGTCGCCG TCACTCACCG CGCGCTCATG GCGAACCTCG CCGGCCATTC GCATGGCATG
AAGATCGCGG ACCCCGATCG CGCGATCTCG TGGCTGCCCT GGTATCACGA CATGGGGCTC
GTCGGCTGCT TCCTCTCGCC GATCGCCAAT GGCGTGTCGG TCGATTACCT CAAGACCGAG
GACTTCGCCC GCCGCCCGCT CGCCTGGCTC GACCTGATCA GCCGCAACAC CGGCACGACA
CTCTCCTATT CGCCCACCTT CGGCTACGAC ATCTGCGCCC GCCGCATCTC GAGCCAGAGC
CACGTTTCCG ACCGCTTCGA CCTTTCGCGC TGGCGCGTCG CCGGCAACGG GGCCGACATG
ATCCGCCCCG ACGTGATGCA GAACTTCGTC AACGCCTTTG CCGAGGCCGG GTTCAAGGCC
GAAGCCTTCC TGCCCAGCTA CGGACTTGCC GAAGCGACGC TTGCCGTCAC CATCATGCCC
CCGGGCGAAG GCATCCGCGT CGAACTGGTC GAGGAAGAAC GCCTCTCGGG CACCCCGCGC
GACCTTTCGC GCCCGGCCCG CTACCGCGCC ATGGTCAACT GCGGCGTTCC CGTGCGCGGC
ATGGAAGTCG CCATTCGTGG CGAGAACGGC AACGAGATCG GCCACCACCA CATCGGCAAG
GTGTGGTGCC GCGGCTCATC GGTCATGCAC TCCTACTTCC GCGATCCCGA AGCGACCGAC
GCCTGCATGG TCGACGGCTG GCTCGACACC GGCGACATGG GCTACGTCGA CGAGAACGGC
TACCTGTTCA TCGTCGGCCG CGCCAAGGAC ATGATCATCA TCAACGGCAA GAACCACTGG
CCCCAGGACA TCGAATGGGC GGTGGAGCAG CTTCCCGGCT TCCACCAGGG CGATATCGCC
GCCTTCTCGG TCGAGACCGA GAACGGCGAG GAGGCGCCTG CCGTCCTCGT CCATTGCCGC
GTCTCCGACC CGGTCGAACG GGTCAAGCTG CGCGACCAGA TCCGCGACAA GGTTCGCTCG
ATCACCGGCA TGAACTGCGT CGTGGAACTC GTGCCGCCGC GCACCCTGCC GCGCACCAGC
TCGGGCAAGC TGAGCCGGGC CAAGGCCAAG AAGCTCTACC TCACCGGCGA GATCGCGCCC
TATCAGCTCG CAGCCTGA
 
Protein sequence
MTVSDAVADK ATLVPTPNLD VQTRRYADFD TFCDALDYAA KGVLGFNFHD PRGNLARVYP 
YSELREDALV AARKLIGLGV QPGDRVALVA ETGPDFAAIF CGAMYAGAWP VPLPLPTSFG
GKESYIDQLA VQLSSSDPKM LVYPGEIAEM ASAAAARQGC AGLSWDEFHA GAAADGPLPT
PDPDAISYLQ YSSGSTRFPH GVAVTHRALM ANLAGHSHGM KIADPDRAIS WLPWYHDMGL
VGCFLSPIAN GVSVDYLKTE DFARRPLAWL DLISRNTGTT LSYSPTFGYD ICARRISSQS
HVSDRFDLSR WRVAGNGADM IRPDVMQNFV NAFAEAGFKA EAFLPSYGLA EATLAVTIMP
PGEGIRVELV EEERLSGTPR DLSRPARYRA MVNCGVPVRG MEVAIRGENG NEIGHHHIGK
VWCRGSSVMH SYFRDPEATD ACMVDGWLDT GDMGYVDENG YLFIVGRAKD MIIINGKNHW
PQDIEWAVEQ LPGFHQGDIA AFSVETENGE EAPAVLVHCR VSDPVERVKL RDQIRDKVRS
ITGMNCVVEL VPPRTLPRTS SGKLSRAKAK KLYLTGEIAP YQLAA