| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0808 |
|---|
| Symbol | |
|---|
| ID | 3915862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 859691 |
|---|
| End bp | 861217 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640443539 |
|---|
| Product | carboxyl transferase |
|---|
| Protein accession | YP_496087 |
|---|
| Protein GI | 87198830 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA ATATTGCCGA GATGGAAAAG CGCCGGGAAG CCGCGCGACT GGGTGGCGGG
CAGAAGCGCA TCGATGCGCA GCACGCCAAG GGCAAGCTGA CCGCGCGCGA ACGCCTCGAA
GTACTGCTTG ACGAAGGCAG CTTCGAGGAA GTGGACATGT ACGTCGAGCA TAATTGCGTC
GACTTCGGCA TGCCCGACAC GGTGATCCCT GGCGACGGCG TGGTGACGGG TTCGGGCACG
ATCAACGGCC GCCTGGTCTA TGTGTTCAGC CAGGACTTCA CCGTGTTCGG CGGCTCGCTT
TCCGAGCGTC ACGCGCAGAA GATCTGCAAG ATCATGGACA TGGCGCTCAA GGTCGGGGCT
CCGGTGATCG GGCTCAACGA TTCGGGCGGC GCGCGCATCC AGGAAGGCGT GGCATCGCTT
GGCGGCTATG CCGAAGTGTT CCAGCGCAAC GTGCTGGCAT CGGGCGTGGT GCCGCAGCTT
TCGCTGATCA TGGGGCCTTG CGCGGGCGGT GCGGTCTACA GCCCCGCGAT GACCGACTTC
ATCTTCATGG TGAAGGACAG CTCGTACATG TTCGTGACCG GGCCGGACGT GGTCAAGACG
GTGACGAACG AGATCGTGAC GCAGGAGGAA CTGGGTGGCG CGGTGACGCA CACGACCAAG
ACCTCGGTCG CGGACCTTGC GCTCGAGAAC GACATCGAGG CGCTTCTCGC CGCGCGCGAC
TTCTTCGATT ACCTGCCGCT GTCGAACCGG CAGGAAGTGC CCGAGCGGCC GACTTCGGAC
CCATACGACC GTCTGGAGCC GAGCCTCGAC AGCATCGTGC CGGCTTCGGC GACGCAGCCC
TATGACATGC ACGAAGTGAT CCGCAAGACG GTGGACGAAG GCGAGTTCTT CGAGATCCAG
CCCAAGCATG CGGGCAACAT CATCTGCGGT TTCGGCCGCG TCGAAGGGCG TACCGTGGGC
GTGGTCGCCA ACCAGCCGAT GGTGCTGGCG GGCGTGCTCG ACATCAATTC GTCGAAGAAG
GCGGCGCGGT TCGTTCGCTT CTGTGATGCG TTCAACATTC CGATCGTGAC CTTCGTCGAC
GTTCCGGGCT TCCTTCCCGG CACCGCGCAG GAGCACAACG GCATTATCAA GCACGGCGCG
AAGCTGCTGT TCGCCTATGC CGAGGCGACC GTGCCGAAGA TCACCGTGAT CACCCGCAAG
GCCTATGGCG GCGCCTATGA CGTGATGGCC TCGAAGCACC TGCGCGGCGA CCTCAACTAC
GCCTGGCCCA CCGCCGAGAT CGCGGTGATG GGCGCGAAGG GCGCGGTCGA GATCATCTTC
CGCGGGCTTT CGGCGGAAGA GCAGGCGGTG AAGACCAGGG AATACGAGGA CCGCTTCGCC
AACCCGTTCG TGGCGGCGAG CAAGGGCTTC GTCGACGAGG TGATCCATCC GCACTCGACC
CGTCGCCGCG TGGCGCTCGG CCTGCGCAAG CTGCGCAACA AGAGCCTCGA GAATCCGTGG
AAGAAGCACG ACAACATTCC GCTCTGA
|
|---|
| Protein sequence | MSANIAEMEK RREAARLGGG QKRIDAQHAK GKLTARERLE VLLDEGSFEE VDMYVEHNCV
DFGMPDTVIP GDGVVTGSGT INGRLVYVFS QDFTVFGGSL SERHAQKICK IMDMALKVGA
PVIGLNDSGG ARIQEGVASL GGYAEVFQRN VLASGVVPQL SLIMGPCAGG AVYSPAMTDF
IFMVKDSSYM FVTGPDVVKT VTNEIVTQEE LGGAVTHTTK TSVADLALEN DIEALLAARD
FFDYLPLSNR QEVPERPTSD PYDRLEPSLD SIVPASATQP YDMHEVIRKT VDEGEFFEIQ
PKHAGNIICG FGRVEGRTVG VVANQPMVLA GVLDINSSKK AARFVRFCDA FNIPIVTFVD
VPGFLPGTAQ EHNGIIKHGA KLLFAYAEAT VPKITVITRK AYGGAYDVMA SKHLRGDLNY
AWPTAEIAVM GAKGAVEIIF RGLSAEEQAV KTREYEDRFA NPFVAASKGF VDEVIHPHST
RRRVALGLRK LRNKSLENPW KKHDNIPL
|
|---|
| |