Gene Saro_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0794 
Symbol 
ID3915848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp843248 
End bp844180 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content65% 
IMG OID640443525 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_496073 
Protein GI87198816 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.113929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAATC TGCCGGGCAA GACGGCTTTC GTGACGGGCG GCGCCAGCGG CATCGGCCTG 
GGCATCGCCA AGGCGCTGCT TGGCGCCGGG ATGAACGTGA CCATCGCGGA CATCCGCCAG
GACCACCTCG ATTCGGCCGT GGCAGAGCTG GGCGGCGGCG AGCGGGTGCT CGCGGTGAAG
CTCGACGTGA CCAATCGCGA CCAGTTCGCC AAGGCAGCCG ACGCCACCGA GGCGAAGTTC
GGCAAGATTC ACCTGCTGGT GAACAATGCG GGCGTTGCCG TGGTCGGCCC GACCGAGCTG
GCGACTTTTG CCGACTGGGA CTGGGTCATG GGCGTGAACG TGAATGGCAC GATCAACGGC
ATCGTCACCA TCCTGCCCCG CATCCTCGCC CACGGCGAAG GCGGCCATAT CGTCTGCACC
GCTTCGATGT CGGCGCTTGT GCCGGTTGCG GGAACGACGA TCTATTCGGC CGGCAAGGCT
GCCGTGACCG CGATGATGGA ATGCATGAGG CCCGAGCTTG AAGGCAGGGG CGTGATCTGC
TCGGCATTCT GCCCCGGCGC GGTCCAGTCG AACATTGCCG ATGCCGCCAA GACCCGTCCG
GCCGAGTTGG CTGACACCGG CTATGCCGAA GCCGACAAGC GCCGCGCGGC CGGCGGCAAC
TTCATGCACT TGTACCAGAC CAAGGAACAA GTCGGCGAGC GCGTGCTGGA AGGCATCCTC
AACGACGAAC TCTATATCCT GACCCACGCA GAGTTCCTGA CCGGGGTGGA AGAGCGCGGC
CTTGCCACGA CGGCGGCAGT GCAGACCCAC TTGCCCGAGA ACCCGGAATA CAAGGAGACC
TTCGCAGCCC TGTTCCGCAA TCCGGCGATC ACCGACGAAA TCGCCCGGCA GAACAAGCTG
AAGGAAACCC GCAAGGCCGG GGTCGAGGCA TGA
 
Protein sequence
MQNLPGKTAF VTGGASGIGL GIAKALLGAG MNVTIADIRQ DHLDSAVAEL GGGERVLAVK 
LDVTNRDQFA KAADATEAKF GKIHLLVNNA GVAVVGPTEL ATFADWDWVM GVNVNGTING
IVTILPRILA HGEGGHIVCT ASMSALVPVA GTTIYSAGKA AVTAMMECMR PELEGRGVIC
SAFCPGAVQS NIADAAKTRP AELADTGYAE ADKRRAAGGN FMHLYQTKEQ VGERVLEGIL
NDELYILTHA EFLTGVEERG LATTAAVQTH LPENPEYKET FAALFRNPAI TDEIARQNKL
KETRKAGVEA