| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0792 |
|---|
| Symbol | |
|---|
| ID | 3915846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 840993 |
|---|
| End bp | 842240 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640443523 |
|---|
| Product | aromatic amino acid aminotransferase |
|---|
| Protein accession | YP_496071 |
|---|
| Protein GI | 87198814 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.230446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGGGT TGCCCCCGCC GCGTTCCGGC GGCATGGAGC CGCCGCATTT TGCTCCCCGC
AATGGAAGGC CGCGACCAAT GCTCGAAAAT CTTGCCGCCC AGCCCGCCGA CGCGCTGCTG
GCGCTGATCA AGCTTCACAA CGCCGATCCG CGCGAAGACA AGATTGACCT TGGCGTCGGT
GTCTATCGCA CGTCCGAGGG CGCTACCCCT GTTTTCAAGG CGATCAAGGC GGCCGAGGCC
AAGCTGCTCG AAAGCCAGGA TTCCAAGGCC TACCTCGGCC CCGAAGGCGA CATGGGCTTC
GTCCACGCGC TGATCCCCTA TGTCTTCGGC AAGGACTTCG ATCGTTCGAA GGTTGAGGGC
ATGCAGGCCC CCGGCGGCAC CGGCGCGGTG CGCCTCGCCA TCGAGGTGGC CAAGCGTTCG
GGCGTCAAGC GGGTCTGGAT GGGCACGCCT TCGTGGCCCA ACCACGCGCA GATCATCGCT
GCTGCCGGCA TGGAGCTGAA GACCTTCAGC CACATGACCG CCGACGGCCT TGCCGATCTC
GAAGCATTGA AGACCGCCCT GGCCGGTGCC GAAGCGGGCG ATGCCGTCCT GCTCCACGGT
TGCTGCCACA ACCCCACAGG CGTCGACTAT ACCGAAGCCC AGTGGGACGA GATCGCCCCG
CTTCTGGTCG AGCGCCAGGT CCTGCCAATC CTCGACCTTG CCTACCAGGG GCTTGGCGCG
GGCATGGAAG CCGACGCCTA TGGCCTGCGC AAGGTGCTCA GCCTCGCTCC GGAAGCGCTG
GTCGCCTATT CGTGCGACAA GAACTTCGGC CTCTATCGTG ACCGCGTCGG CGCTTTCTAT
GCCGTCACGT CCGACGCCAC CGCCCTGGCA AACGCCATGG GCAACGGCGC GACGATCGCG
CGCGCCTCGT GGTCGATGCC GCCCGATCAT GGCGCCGCCG CCGTCCGCCT GATCCTCGAC
GATGCCGAGC TGACCGCAAT GTGGCTGGCC GAGCTCGACG AGATGCGTGA TCGCATGCGC
TGGGTTCGCG ATCGCCTTGC CGCCGCGCAG CACGTCGGCC CGATCAACAT GGCGCCGCTC
GGCGTGCAGA ACGGCCTGTT CTCGATGCTT CCGCTCAGGG CCGACCAGAT TCTCGCCATC
CGCGAGAAGC ACGGCGTCTA CATGGCCGGT TCGGGACGCA TCAACATTGC CGGCCTCACC
ACCGGTAACA TCGACAAGTT CGTCGAAGCC CTGCGCGACG TCGCGTAA
|
|---|
| Protein sequence | MRGLPPPRSG GMEPPHFAPR NGRPRPMLEN LAAQPADALL ALIKLHNADP REDKIDLGVG
VYRTSEGATP VFKAIKAAEA KLLESQDSKA YLGPEGDMGF VHALIPYVFG KDFDRSKVEG
MQAPGGTGAV RLAIEVAKRS GVKRVWMGTP SWPNHAQIIA AAGMELKTFS HMTADGLADL
EALKTALAGA EAGDAVLLHG CCHNPTGVDY TEAQWDEIAP LLVERQVLPI LDLAYQGLGA
GMEADAYGLR KVLSLAPEAL VAYSCDKNFG LYRDRVGAFY AVTSDATALA NAMGNGATIA
RASWSMPPDH GAAAVRLILD DAELTAMWLA ELDEMRDRMR WVRDRLAAAQ HVGPINMAPL
GVQNGLFSML PLRADQILAI REKHGVYMAG SGRINIAGLT TGNIDKFVEA LRDVA
|
|---|
| |