| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0748 |
|---|
| Symbol | |
|---|
| ID | 3918572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 792865 |
|---|
| End bp | 793563 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640443480 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_496029 |
|---|
| Protein GI | 87198772 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGCG TGCGCGATCT CCGCAAGGTG TACACGACGC GGTTCGGCAA GAAGCTCGTG
CTCGACGGCG TCAGCTTCGA CCTGAACAAG GGAGAGCGCC TTGGCGTCCT CGGGCGAAAC
GGGGCAGGCA AGTCCACCAT GGTCCGCCTG GTCAGCGGGG CTGAGCGGCC GACCTCGGGT
TCGATCGACC GGCGCATGTC GGTGTCGTGG CCGCTCGCCT TTGGCGGGGC GTTCCAGTAC
AACCTCACCG GGCTGGACAA CATCCGTTTC ATCAGCCGCA TCTATGATCA GGATTTCGAG
CGCAACCTCG CCTACGTCGA GGAGTTCGCC GAGCTTGGTC CCTACATGCG CGAGCCGCTT
AGGTCCTATT CTTCGGGAAT GAAGGCGCGG TTGGCGTTCG CGATCTCCAT GATCATCGAG
TTCGATTGCT TCCTGATCGA TGAGATCGCC TCGGTTGGCG ATGCCCGTTT TCACGACAAG
TGCAATCACG AGCTGTTCGA GCGGCGGGGC GACCGGGCGA TGATCATCAT CTCGCACGAC
GCGGCTTACG TCCGCGACCA CTGCACGCGC TGGGGCGTGC TCCATGACGG GAGGCTCGAA
CTCTACGGCG ATTTCGAGGT CGCATACGCC GACTTCAAGG AACTCATCGG CTGGAAGCCC
CCGCCGGGCT GGCCCTTTGT GGAACCGACA ACTGCATGA
|
|---|
| Protein sequence | MISVRDLRKV YTTRFGKKLV LDGVSFDLNK GERLGVLGRN GAGKSTMVRL VSGAERPTSG
SIDRRMSVSW PLAFGGAFQY NLTGLDNIRF ISRIYDQDFE RNLAYVEEFA ELGPYMREPL
RSYSSGMKAR LAFAISMIIE FDCFLIDEIA SVGDARFHDK CNHELFERRG DRAMIIISHD
AAYVRDHCTR WGVLHDGRLE LYGDFEVAYA DFKELIGWKP PPGWPFVEPT TA
|
|---|
| |