| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0739 |
|---|
| Symbol | |
|---|
| ID | 3918563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 781541 |
|---|
| End bp | 782284 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640443471 |
|---|
| Product | TonB-like |
|---|
| Protein accession | YP_496020 |
|---|
| Protein GI | 87198763 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC ATGATTCGGA CGATACGGCG CTCCGTGCCA ACCAGCAGGC ATTCTCCCGC
GACCGTTTCG TGGCCACGGG CCTTGCCCTG GCCCTTCATC TGGGCGTTCT GTGGGTGGTC
GTGCTCGGCT TTGGCGGCGT TCCCGCGCTC CTCCCCGAGG TCAAGGACCG GTTCGTCACC
CAAACCTTTG ACGTACCGCT CGAGAAGCCG CAGCCTTCGC CAAGCCCGAC CGCTCCGGAG
CCGGCGGGCG CCTCGGGCGA GGAGGGGCGC AAGGCAGTGG CTCGGCCGGT GATCGCCAAG
GCACGTGTCC CATCGCGCAA GGAGCTGGCG CCGCCGGTGG CGTCGACCGG CAGGGACAAT
GCCTCCGGTT CGTCCGACAA GGGCGCTGGC ACGGGTGGCG GAGGTGAGGG CCAGGGTACC
GGAAGTGGCC TCAGCGGTAC CGGTTCGGGA GGCGGGCTCG CCCGCAAGGC AGAGAAGATC
GCCGGCGATA TCCGCTCGAC CCGCGACTAT CCGGTCGGCA GCCAGGAGGA GCGCATTGGC
AAACGGGTGG TCATCCTGCT GACCGTGGCC GCCGATGGAC GGGTTTCCGA CTGCCGGATC
TATCGTCCGA GTGGCGTGCC AGAAGCCGAT GCCGTGACCT GCCGGCTTGC CAGGGAGCGC
TTCCGTTTCC GTCCCGCGAC TGACGCTTCC GGCAATCCGA TCGTCTCCAC CTATGGGTGG
GAGCAGAGAT GGTTCGCACC GTGA
|
|---|
| Protein sequence | MTTHDSDDTA LRANQQAFSR DRFVATGLAL ALHLGVLWVV VLGFGGVPAL LPEVKDRFVT
QTFDVPLEKP QPSPSPTAPE PAGASGEEGR KAVARPVIAK ARVPSRKELA PPVASTGRDN
ASGSSDKGAG TGGGGEGQGT GSGLSGTGSG GGLARKAEKI AGDIRSTRDY PVGSQEERIG
KRVVILLTVA ADGRVSDCRI YRPSGVPEAD AVTCRLARER FRFRPATDAS GNPIVSTYGW
EQRWFAP
|
|---|
| |