| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0728 |
|---|
| Symbol | |
|---|
| ID | 3918552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 769458 |
|---|
| End bp | 770678 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640443460 |
|---|
| Product | polysaccharide export protein |
|---|
| Protein accession | YP_496009 |
|---|
| Protein GI | 87198752 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0592295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTTCGGC ACCGCAACGC AATCGTCACT GTTACGTTAC GAACGATGTA CCGGAACAGC
AGATATCGGG GCGGCCGAGG AGATGGCGGG AGCGGGGCGC GCAGCTGCCA TGCGGCCATT
CTCGCCCTGC TTGCCGGCAG CGCGACAGGC GGTTGCGCCG CGCTGCCGGC AAGCGGGCCA
ACCGGGCAAG CAATCGTCAG GTCGGCAAAG GCGCCCGGCG CGGCAATGCC ATACCGCCTG
GTCACGCTCG ACAGCCTTTC CGCACTGCCT GCACCTAGTG CCTTCGCGCC CGGCATGCCC
ATGCGATTGG CGCCTCCCCC GACCGACCTC GTAGGACCGG CCGACGTACT CGACATCGCG
ATCTACGAAG CAGGCGTGGC CCTGTTCTCA AATGAAGGCG GCGGGAACCC GATGGCTGCT
GGAGGAGCGG AGGCTGCCGC CAGATCTACC CGTCTCCCTC CCGTTCGCGT GGATGACGAA
GGCAGGATCA GCCTGCCCTT CGTGGGGCAA GTCCGCGCCA TGGGCCACAC CACGGCAGAA
CTGCAGGCCA TCATCCGCAA AGCGCTGCAA CCGATGTCGC AGGACCCGCA GGTCATGGTG
TCGGTCCAGC AATCGATCAC CAACAGCGTG ATCCTGAGCG GGGAGGTCGC CCGGCCGGGA
CGACTGGTCC TCGCCACGAA CCGCGAGACT CTGGCCGAGA CGATTGCCCT TGCCGGCGGG
CAGAAGGGCG ATGCGAAGGA CATAGTCGCA CGGCTATCGA GGAAGGACCG CACCTGGGAA
ATCCGGTTGA ACGACCTTCT GGCCGATGAT CGCCAAGACA TTCCCGTCTA CCCCGGCGAC
CGTATCACGC TCGTCAGCCA GCCGCTGACC TTCGCGGTCA TGGGCGCACC GAACAAGGTA
GACCATTTCC GCTTCCCCCG GTCTTCCATG TCGCTGGCGG AAGCGGTTGC ACTGGCAGGC
GGTGCCAATC CCGATCTGGG CGATGCCGCC GCCGTGTTCG TATTCCGCTT CGAGAGACGC
GAGGATGGCT CGGAGGAACC GGTCGTCTTC CATCTCGACA TGCTGCGCCC AGGTGCCGTC
TTCATCTCGC AACGGTTCGC GATGACGGAC AGGGACGTGC TGTATATCGG CAATGCCCGG
GCCAACCAGC CGGGCAAGCT GATCCAGCTC ATCAGCCAGC TCTTCGCGCC GGTCGTCACG
GTAGAGCGAT TGGCCCGATG A
|
|---|
| Protein sequence | MVRHRNAIVT VTLRTMYRNS RYRGGRGDGG SGARSCHAAI LALLAGSATG GCAALPASGP
TGQAIVRSAK APGAAMPYRL VTLDSLSALP APSAFAPGMP MRLAPPPTDL VGPADVLDIA
IYEAGVALFS NEGGGNPMAA GGAEAAARST RLPPVRVDDE GRISLPFVGQ VRAMGHTTAE
LQAIIRKALQ PMSQDPQVMV SVQQSITNSV ILSGEVARPG RLVLATNRET LAETIALAGG
QKGDAKDIVA RLSRKDRTWE IRLNDLLADD RQDIPVYPGD RITLVSQPLT FAVMGAPNKV
DHFRFPRSSM SLAEAVALAG GANPDLGDAA AVFVFRFERR EDGSEEPVVF HLDMLRPGAV
FISQRFAMTD RDVLYIGNAR ANQPGKLIQL ISQLFAPVVT VERLAR
|
|---|
| |