Gene Saro_0720 details

Gene Information

• Locus tag: Saro_0720
• ID: 3918544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: -
• Start bp: 759902
• End bp: 760549
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640443452
• Product: ABC transporter related
• Protein accession: YP_496001
• Protein GI: 87198744
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCACCT GCCAGATGAT CCACAAGACG TACGCCGCCG GGCACGGAGA ACGCAAGGTC 
CTGCGCGGGC TCGATTTCGC CATCTCGAGA GGCGAGCATG TGGGCTTTCT CGGTCGCAAC 
GGCGCGGGCA AGACGACGCT GATCAAACTG CTTGGCGGCG TGGAGTTTCC GACGGCGGGC 
ACGATCCGGC GGCGCATGAC GGTGTCGTGG CCCCTCGGCT TTGGCGGCGG CTTTCAGGGC 
AGCCTGACCG GCTACGATAA CGCGCGCTTC ATCGCCCGCA TCTATGGCAT GTCCTACCGC 
GACATCGCCG ACTTCGTCGA GGACTTCACC GAACTTGGCC GCCAGTTGCG GGCCCCGGTC 
AAGACCTACT CGCAAGGCAT GCGCGCGCGT CTTGCCTTCG CCCTTTCCAT GGCGATCGAG 
TTCGACTGCT ATCTTGTCGA CGAAGTTATT CTCGTGGGGG ACCACCGTTT CCACGAGAAA 
TGCAGGCTCG AGTTGTTCGG CAAGCGGTCC GACCGAGCAC TGATCCTTGC CTCGCACAAC 
GCCGCCCTGA TCCGCGAGCA TTGCACGCGC GCCATGGTCC TGCACGATGG GCGGGGTACG 
ATGCACGACG ACATAGACCT TGCCCTTCGT CACTACGAGG CGCTGTAA 

 

Protein sequence

MITCQMIHKT YAAGHGERKV LRGLDFAISR GEHVGFLGRN GAGKTTLIKL LGGVEFPTAG 
TIRRRMTVSW PLGFGGGFQG SLTGYDNARF IARIYGMSYR DIADFVEDFT ELGRQLRAPV 
KTYSQGMRAR LAFALSMAIE FDCYLVDEVI LVGDHRFHEK CRLELFGKRS DRALILASHN 
AALIREHCTR AMVLHDGRGT MHDDIDLALR HYEAL