| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0704 |
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| Symbol | |
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| ID | 3918528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 743286 |
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| End bp | 746729 |
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| Gene Length | 3444 bp |
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| Protein Length | 1147 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640443436 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_495985 |
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| Protein GI | 87198728 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGA CCGCGCCCTT CGCCGCATTC GCGCCCCGCC ATTCCGTGCC CTCCGACCTG
CGCCGGGCGA TTACCGCCGC CACCCGCCGC GCGGAACGCG AGTGCATGGT CATGCTCCTG
CCGGAAGCAA CCTTGCCACA GGCAACCCGG GCTTCGGCAC AGGCGCTGGC ACGCAAGCTG
GTCGAGGCCC TGCGCGCCAA GCCGCGCGGG AACGGGGTGG AGCAACTCGT GCAGGAGTAT
GCCCTCTCGA CGCACGAAGG CGTCGCCCTG ATGTGTCTTG CCGAGGCGTT GTTGCGCATT
CCCGATAACG ATACGCGCGA CGATCTCATC CGCGACAAGA TCGCGGGAGG CGACTGGCTG
GCGCACCTCG GCGGCGACCG TTCGCTCTTC GTCAACGCCG CGACGTGGGG CCTCGTCGTC
ACCGGGAAGC TTGCCTCCAG CGTCGACGAC ACCGGCCTTG GCGCGGCCCT CACCCGCCTC
ATCGCCCGTG CGGGCGAACC TGTCATCCGC CGCGGCGTCG ACCTCGCCAT GCGCATGATG
GGCGAACAGT TCGTCACCGG CGAGACCATC GACGAGGCGC TGAAGCGCGC CCGTCCGCTC
GAGGATCGTG GCTTCCGCTA CAGCTATGAC ATGCTGGGCG AGGCGGCCAT GACTGCAAGC
GACGCCGCCC GCTACCATGC AGATTACCAG GCCGCCATCC ACGCAATCGG CAAGGCCGCC
GCACGTCGCG GCGTCTACGA AGGCCCCGGC ATCTCGATCA AGCTCTCCGC GCTGCACCCG
CGTTACGCGC GCGCGCAGCA GGACCGCGTG TTCGCCGAAC TCCTGCCCCG TCTCAAGGCG
CTGGCTTATC TCGCGTTGCG CTACGACATC GGCCTCAACA TCGATGCCGA AGAGGCCGAC
CGCCTCGAAC TCTCGCTCGA CCTGCTCGAA GAGCTGGCGA TGGACCCGGA GCTTGCAGGC
TGGAACGGAC TGGGCTTCGT CGTCCAGGCC TACGGCAAGC GCTGCCCCTT CGTAATCGAC
TGGATTGTCG ATCTTGCCCG CAGGTCGGGC CGCAGGATCA TGGTCCGCCT CGTCAAGGGC
GCCTATTGGG ACGCAGAGAT CAAGCGTGCG CAGGTCGACG GGCAGTCCGG CTTCCCGGTC
TACACCCGCA AGGCCCACAC CGATGTCGCC TATATCGCCT GTGCCCGCCG GCTGCTCGCC
GCGACCGACG TCGTGTTCCC CCAGTTCGCC ACCCACAACG CCCAGACACT CGCCACCATC
CACGAGATGG CAGGCCCGGA CTTTGCTGTT GGCCGTTACG AGTTCCAGTG CCTCCACGGC
ATGGGCGAAC CGCTCTATGA CGAGGTTGTC GGCAAGGACA AGCTGGACCG CCCCTGCCGC
ATCTACGCGC CGGTCGGCAC GCACGAAACG CTGCTGGCCT ACCTCGTCCG CCGCTTGCTG
GAAAACGGCG CGAACTCTTC ATTCGTCAAC CGCATCGCCA ACCCGGACGT GCCGGTCGAT
GAAATCGTTG CCGATCCCGT GGCGCAGGTT GCCGCTGATG CCGATCCCGG CGCGCCCCAT
CCCCTGATCG CCCTTCCCGC CGCGCTTTAT CCCGACCGCC GCAACAGCAG CGGTCTCGAC
CTTGCGGACG AAAGCACCCT CGCCGCCCTC ACGGACCGAT TCCAGGCGAT TTCCGCCCAT
TCGCGTCACG CCCACCCGTC CGCCGACCTG CCCCACGTCA ATCCGCGCCC GGTTCTGAAT
CCGGCGAACC ACAGGGATGT AGTTGGCCAC GTCAGCGAGG CCGCACCAGC GGCTGCTGGC
ATGGCAGCCA GCCTCGCCGC AGCCTCGCGC TGGAGCGCGA CGCCCGTAGC CGCCCGCGCC
ATGATCCTGG AACGCGCGGC AGACGCCATG CAGGCGGCTA TGCCCGAACT CATCGCGCTG
ATCGTGCGCG AGGCTGGAAA GTCCGTGTCC AACGCCATTG CCGAAGTGCG CGAGGCTGTG
GATTTCCTGC GCTATTACGC CAGCCAGGCG CCTGCCATGT CCGGTTCGCG GCCTCTCGGG
GTCGCCTTGT GCATCAGCCC GTGGAACTTC CCCCTCGCCA TCTTCACCGG CCAGGTGGCG
GCCGCGCTCA TGGCGGGCAA CCCGGTCCTC GCCAAGCCTG CCGAAGAAAC GCCGCTCATT
GCCTCTGAAG CCGTGCGCAT CCTCCATGAA GCGGGCGTAC CCGACGATGC CCTCGTATTC
CTGCCGGGAG ACGGCGCCAT CGGAGCCGCA CTGGTCGCTG CGCCGGAAAT CGCCGCCGTG
CTTTTCACCG GATCGACGGA AGTCGGCCGT TTGATCCAGC GCCAGCTCGC CACCCGGCTT
TCCGCGGAGG GCCGCCCGAT CCCTCTGATT GCCGAAACCG GCGGCCAGAA CGCGATGATC
GTCGACAGTT CCGCGCTTGC CGAACAGGTC GTGGCCGATG TGATCGCATC TGCCTTCGAC
AGCGCGGGCC AACGCTGTTC GGCCCTGCGC GTCCTGTGCC TCCAGGAGGA CGTTGCGGAT
CACGTCCTCG CCATGCTGCG CGGCGCGCTG GCGGAACTCA CGGTCGGTCC GACCGACCGC
CTCAGCGCCG ACATTGGCCC CGTCATCGCC GCCGAGGCGC GCGAAGCGAT CGAGGCGCAC
GTCGCCCGCA TGGAAGCTGC CGGTTGCCCA GTCCACCGCC TGCCGCTCGG CACCGCCACC
AACGAGGGCA CTTTCGTTGC CCCGACGATC ATCGAACTGT CCGCCCCCGA TCTCCTCACG
CGCGAGGTCT TCGGGCCGGT CCTCCACGTC ATCCGCTTCC GCCGAGCCGA CATGGACGCC
ATGGTCGAGC GCATCAATGC CTGGGGCTAT GGCCTGACCT TCGGCCTCCA CACCCGCCTC
GACGAGACGG TCGCCCGCGT TACGGCGAAG GCCCATGCTG GCAACATCTA CGTCAACCGG
AACGTCATTG GCGCGGTGGT CGGCGTCCAG CCGTTCGGCG GCCACGGCCT GTCCGGCACG
GGCCCGAAAG CAGGCGGCCC GCTTTACCTG CGCCGCCTTG TCGCCAGCGC CCCTGCCGCA
CCCGCACTGG AGTTGACTGA GCGCGAACTG CCTGGCCCCG TCGGCGAACG CAACATCTAC
GCCCTGCGCC CCGTAGGCCG GGTCCTTGTC GCCGCCCAGT CGCCAGAGCG CCTTGCCGCC
CTCACCAGCC GCGTCGAACG GCTCGGCGGC ACACCCATCG CGGCCGACGA TGGCTGGCAG
GCGCAAGGCC CCTTCGCCCG CGCCCTTGTC GAAGGCGACG CGGCGTTCAT CCTCTCTTTC
CAGCAGGCCG TGGCGGCCCT CGACGGGCCC ATCGCACCTG TCCTTGCCTC TGCGGACGAC
GACACGATGC TGGTGGCCGA GGTGTCGCTC TCGATCAACA CCACCGCCGC TGGCGGCAAC
GCCAGCCTGA TGGCCATGGC CTGA
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| Protein sequence | MTQTAPFAAF APRHSVPSDL RRAITAATRR AERECMVMLL PEATLPQATR ASAQALARKL
VEALRAKPRG NGVEQLVQEY ALSTHEGVAL MCLAEALLRI PDNDTRDDLI RDKIAGGDWL
AHLGGDRSLF VNAATWGLVV TGKLASSVDD TGLGAALTRL IARAGEPVIR RGVDLAMRMM
GEQFVTGETI DEALKRARPL EDRGFRYSYD MLGEAAMTAS DAARYHADYQ AAIHAIGKAA
ARRGVYEGPG ISIKLSALHP RYARAQQDRV FAELLPRLKA LAYLALRYDI GLNIDAEEAD
RLELSLDLLE ELAMDPELAG WNGLGFVVQA YGKRCPFVID WIVDLARRSG RRIMVRLVKG
AYWDAEIKRA QVDGQSGFPV YTRKAHTDVA YIACARRLLA ATDVVFPQFA THNAQTLATI
HEMAGPDFAV GRYEFQCLHG MGEPLYDEVV GKDKLDRPCR IYAPVGTHET LLAYLVRRLL
ENGANSSFVN RIANPDVPVD EIVADPVAQV AADADPGAPH PLIALPAALY PDRRNSSGLD
LADESTLAAL TDRFQAISAH SRHAHPSADL PHVNPRPVLN PANHRDVVGH VSEAAPAAAG
MAASLAAASR WSATPVAARA MILERAADAM QAAMPELIAL IVREAGKSVS NAIAEVREAV
DFLRYYASQA PAMSGSRPLG VALCISPWNF PLAIFTGQVA AALMAGNPVL AKPAEETPLI
ASEAVRILHE AGVPDDALVF LPGDGAIGAA LVAAPEIAAV LFTGSTEVGR LIQRQLATRL
SAEGRPIPLI AETGGQNAMI VDSSALAEQV VADVIASAFD SAGQRCSALR VLCLQEDVAD
HVLAMLRGAL AELTVGPTDR LSADIGPVIA AEAREAIEAH VARMEAAGCP VHRLPLGTAT
NEGTFVAPTI IELSAPDLLT REVFGPVLHV IRFRRADMDA MVERINAWGY GLTFGLHTRL
DETVARVTAK AHAGNIYVNR NVIGAVVGVQ PFGGHGLSGT GPKAGGPLYL RRLVASAPAA
PALELTEREL PGPVGERNIY ALRPVGRVLV AAQSPERLAA LTSRVERLGG TPIAADDGWQ
AQGPFARALV EGDAAFILSF QQAVAALDGP IAPVLASADD DTMLVAEVSL SINTTAAGGN
ASLMAMA
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