| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0617 |
|---|
| Symbol | |
|---|
| ID | 3915630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 665462 |
|---|
| End bp | 666613 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640443348 |
|---|
| Product | phage integrase |
|---|
| Protein accession | YP_495898 |
|---|
| Protein GI | 87198641 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.342043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTGG CCGGTGTTCA CTTCGTTCGC TCCGCCAAGT CGGGCAAGCC GATTCGCTGG
TACATCTACG CCTGGCGCGG CGGGCCGCGC ATCCGAGTAG CGGAACAGGC AACCCAACCG
CGCCTGACCA AGGCTGATAT CGCCGCGATC GCCGCAGCAC AGCAGGCTAG CGACGAGCCG
GCGGATACCG TCAAAGGCCT GTCCACCAGG TGGCAGCGGA GCCGCGAATG GAAGGCCTTC
GCCGAATCCA CGCGCAGCCT GTGGGGCGAC TGCTGCACAA AGATCGAGGA AAAGTGGGGC
AAGGTCCCGC TTCGGGTCTT CGGAGATCCG CGCACCACGT CGAAGATCGT GAAGTGGCGC
GATGAAATGG CGGACGCAAA TGGCCTGCGA ACCGCCGACG AGCATGTGAA GGTGCTGTCC
ATGATGGCCA AGTATGGCCT GCTGCAGGGC CTGATGGCGT GCAACCCCGC GCAGCCGGTG
CCGCGCCTAT GGAAGGGCGG CAATCGCGAG GAGATCATCT GGCTCCCGGA AGACTGTGCT
GCTTTCGATG CCGTCGCCCC ACAATGGCTG GTCGACGCGC GCAAGCTGGC CGAGTTCACC
GGTATGCGAC GCGCCGATCT TTGCGCCCTG CGCCGGGACG AAGTCTTCGA CACACATATC
GGACGAACGG CCAAGAAGAA GTCGGCCGGC AAGCGCCAGC GCACGGTCAT GCCGATCATT
CCAGGGCTTC GCGAACTGCT CGAGGAGCTG CGCGCCCGTA CGCGCAAGCC CGGCATCGAA
ACGGTGTTGG TCGGGGCTCA TGGCAACCCC GTGCAGCCCG CAACGCTGTC GGCCCAGTTC
AACAAGTACC GCTCGCTCGC CAACGATGGC CAGGGCATCG TCCACCGCGC GGCCTACGAC
GACGAAGCGG ACAAGGCGAA GCATCTCCAC GATCTCCGCG GCACGTTCGC AACCAAGCTC
ATGACGCTTC CGGGTGGCGG GCTGACCGAC GATCAGATTG CCAGCGTCAT GGGGTGGAGC
TCCGACCAGG TCGCCACAAT CCGCAAAAGA TACGTTGACG AAGCGGCCAT CGTCGTGGCA
ATCGGCAAGC GCATTGCCGA GGCAGCTGTA AAACAGCCTG TAAAACGGCA GGGCAAGCAG
GCACGTAAGT GA
|
|---|
| Protein sequence | MSVAGVHFVR SAKSGKPIRW YIYAWRGGPR IRVAEQATQP RLTKADIAAI AAAQQASDEP
ADTVKGLSTR WQRSREWKAF AESTRSLWGD CCTKIEEKWG KVPLRVFGDP RTTSKIVKWR
DEMADANGLR TADEHVKVLS MMAKYGLLQG LMACNPAQPV PRLWKGGNRE EIIWLPEDCA
AFDAVAPQWL VDARKLAEFT GMRRADLCAL RRDEVFDTHI GRTAKKKSAG KRQRTVMPII
PGLRELLEEL RARTRKPGIE TVLVGAHGNP VQPATLSAQF NKYRSLANDG QGIVHRAAYD
DEADKAKHLH DLRGTFATKL MTLPGGGLTD DQIASVMGWS SDQVATIRKR YVDEAAIVVA
IGKRIAEAAV KQPVKRQGKQ ARK
|
|---|
| |