| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0600 |
|---|
| Symbol | |
|---|
| ID | 3915612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 645059 |
|---|
| End bp | 645979 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640443330 |
|---|
| Product | sterol desaturase-like |
|---|
| Protein accession | YP_495881 |
|---|
| Protein GI | 87198624 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGA GTCACAAGAA GACCAGTCCT GTCGATCTGA TCCCGCCCGC GATGATCGCA
GTTGTCCTGT TGTTCTGGGC TTTCGCGCCC AAGGCGATAC TCGACAATCC GTGGACGCTG
GTGGTGACAT CGCCGCTCAT CGTGATCGTG GTCCTGCTGC TTGAATTCGT GTTCGAGCGC
CATGAAGGCT GGCGGATCAA CCGGCAGGAG TTCCTCACCG ACCTCTATTA TTCGGTGCTG
AGCGCGACGG TCATATCGTG GCTCACGCAG AAGCTGGCCG AAGATCCGCT GCTGGCGGTC
AAGTCATCGC TTGGAATTAC CACGCAATGG GCCGCGCAGA TGCCGTGGCT CGCGCAGGTT
GCCCTGGTGA TCTTCCTCAT CGAGTTCGGC CAGTACTGGA TGCACCGGCT GATGCACAAC
TCGACGCCGT TCTGGCTGAC CCATGCGCCG CATCACCACA TCACGCAGCT CAATGCCGCC
AAGGGCGCGG TGGGCAATCC GATCGAGCTG TTCCTGATCA GCCTGAGCGT GGTCGCGCTG
TTCGACCTCG ACAAGACCGC GATCTTCGCG GCCCTCAACA CCACGGGCGT GATCTCCACC
TTCGCCCATG CCAACGTGCG CGCCAATCCG CCGATCTGGT ATTCGTTCTT CTTCACCACG
ATCCGGCACC ACAGCCTGCA CCACTCGACC GACTACGAGA GCACGCGCTG CAACTATGGC
AACTCGCTGA TCCTGCTGGA CCGAATCTTC GGCACCTATC GTGAGGGCGA AGGCGTGCTG
GTGGGGCAGG ACGACCGCAG GCGGCTCTCG ATCCTCGAAC AGACGCTGTT TCCGTTCCAG
CCGCTGATCG ACCGCTTCAA GGCGCGGAGA CGAGAGCGCG ACGGGGCGGC GGGCGATGCC
GGAGGCCCAG CCGCCGCATG A
|
|---|
| Protein sequence | MSTSHKKTSP VDLIPPAMIA VVLLFWAFAP KAILDNPWTL VVTSPLIVIV VLLLEFVFER
HEGWRINRQE FLTDLYYSVL SATVISWLTQ KLAEDPLLAV KSSLGITTQW AAQMPWLAQV
ALVIFLIEFG QYWMHRLMHN STPFWLTHAP HHHITQLNAA KGAVGNPIEL FLISLSVVAL
FDLDKTAIFA ALNTTGVIST FAHANVRANP PIWYSFFFTT IRHHSLHHST DYESTRCNYG
NSLILLDRIF GTYREGEGVL VGQDDRRRLS ILEQTLFPFQ PLIDRFKARR RERDGAAGDA
GGPAAA
|
|---|
| |