Gene Saro_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0597 
Symbol 
ID3915609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp642174 
End bp643286 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content65% 
IMG OID640443327 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_495878 
Protein GI87198621 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCATCC AGACAAAGGG CCAGACCGAC CTGTTCGAAA ACCCGCTCGG CCTCGACGGC 
TTCGAATTCA TCGAGTTCTC CGCACCGGAA GCGGGCAGCC TCGAGCCAGT CTTCGCGCGC 
ATGGGCTTCA CCCACATCGC CAACCATCGC TCCAAGCAGG TCCAGCTCTG GCGCCAGGGC 
GGCATCAACC TCATCGCCAA CCACGAACCG CGCAGCCCTG CGGCCTACTT CGCCGCCGAG 
CACGGCCCAT CGGCCTGCGG CATGGGCTGG CGCGTGCGCA ACGCGGCCAA GGCCTATGCC 
ACCGCTATCG AGCGCGGGGC CGAGCCGGTC GAGGTCCGCA CCGGACCGAT GGAACTGCGC 
CTGCCCGCGA TCCGCGGCAT CGGCGGTTCG ATCATCTATC TCATCGACCG CTACGAAGGC 
GGCCAGTTCG GCGACCTCTC GATCTACGAC ATCGACTTCG AATATCTCCC CGGAGTGGAC 
CGGCATCCCG TCGGCGCGGG TTTCCACACC ATCGACCACC TGACCCACAA CGTCTACGGC 
GGGCGCATGG CGCACTGGGC TTCGTTCTAC GAGCGCGTGT TCGGCTTCCG CGAGATCCGC 
TACTTCGACA TCAAGGGCGA ATATACCGGC CTCACCAGCC GAGCGATGAC CGCGCCCGAT 
GGCAAGATCC GCATTCCGCT GAACGAGGAA GCCAAGGCAG GCGGCGGCCA GATCGAGGAG 
TTCCTGCGCG CCTACAACGG CGAGGGCATC CAGCACATCG CCTTCGCCTG CGACGACCTG 
CTCGGCGGGT GGGACAAGCT CAAGGCCATT GGCACCCCCT TCATGTCCCC GCCGCCCGCG 
ACCTACTACG AAATGCTCGA CGAACGCCTG CCCGGCCATG GCGAGCCGGT GGCGGAACTG 
CAGAAGCGCG GCATCCTGCT CGACGGCTCC ACCGAAGAGG GCGATCCCCG CCTCCTGCTG 
CAGATCTTCT CCGAAACCCA GATCGGCCCG GTGTTCTTCG AGTTCATCCA GCGCAAGCGC 
GACGAAGGCT TTGGCGAAGG CAATTTCACC GCCCTGTTCA AGTCGATGGA ACGCGACCAG 
CTTCGTCGCG GCGTGCTCAA GACCGAAGCC TGA
 
Protein sequence
MSIQTKGQTD LFENPLGLDG FEFIEFSAPE AGSLEPVFAR MGFTHIANHR SKQVQLWRQG 
GINLIANHEP RSPAAYFAAE HGPSACGMGW RVRNAAKAYA TAIERGAEPV EVRTGPMELR 
LPAIRGIGGS IIYLIDRYEG GQFGDLSIYD IDFEYLPGVD RHPVGAGFHT IDHLTHNVYG 
GRMAHWASFY ERVFGFREIR YFDIKGEYTG LTSRAMTAPD GKIRIPLNEE AKAGGGQIEE 
FLRAYNGEGI QHIAFACDDL LGGWDKLKAI GTPFMSPPPA TYYEMLDERL PGHGEPVAEL 
QKRGILLDGS TEEGDPRLLL QIFSETQIGP VFFEFIQRKR DEGFGEGNFT ALFKSMERDQ 
LRRGVLKTEA