| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0554 |
|---|
| Symbol | |
|---|
| ID | 3918684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 604391 |
|---|
| End bp | 605263 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640443284 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase |
|---|
| Protein accession | YP_495835 |
|---|
| Protein GI | 87198578 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.567205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGA CGGTAGCTGT CATCGGCGCG GGCCAGATGG GTTCGGGCAT TGCGCAGGTT
TCGGCGCAGG CGGGCATGAA GGTCCTGCTC GGCGACGTCT CGATCGAGCT GGCGGACAAG
GCCAGGGACA AGATCGCCAA GGGTCTTTCC AAGCTGGTCG AGAAGGGCAA GGTCGATGCC
ACGCTCGCCG CGTCGACGGT CGCCAACCTT CACACCTTCT CCGATCATGC CGCGCTGGCC
GAGGCCGACC TCGTCATCGA GGCCGCGACC GAGCGCGAGG ACATCAAGCA CAAGATCTTC
GAATCGGCAG GCAGGCACTT GGCCGCCCAT GCGATCATGG CGTCGAACAC GTCTTCGATC
CCGATCACCC GCATGGCCGT CTCCTCGCCC GATCCGGAGC GCTTCATCGG CATCCACTTC
TTCAACCCGG TTCCGCTGAT GAAGCTGGTC GAGGTGATCC CTGGTCTTGC GACGTCGGTC
CCGACGATCG AAGCGGTGCG TGATTACGTG GCGAACATCG GCAAGGAAAT CGTGCTTTCG
CAGGACGAGC CCGGCTTCAT CGTCAACCGC ATCTTCGTGC CGTTCATCAA CGAGGCGGCC
TTCGTGCTGG GCAGCGGCAC CGGGTCGATC GTGGATATCG ACAAAGGCGT CAAGCTGGGC
CTCAACCATC CGATGGGCCC GCTCGAACTG GCGGACTTCA TCGGGCTCGA TACCCTGCTC
GAGATCATGA AGATCTACCT CGCCTCGACC GGCGACCCGA AGTACCGCCC GGCCCCGCTG
CTGCAGAAGT ACGTCGAGGC GGGCTGGCTC GGCCGCAAGA CCGGCCGTGG CTTTTACGAT
TACTCGGGCG AGGTGCCTGT TCCCACTCGT TGA
|
|---|
| Protein sequence | MIKTVAVIGA GQMGSGIAQV SAQAGMKVLL GDVSIELADK ARDKIAKGLS KLVEKGKVDA
TLAASTVANL HTFSDHAALA EADLVIEAAT EREDIKHKIF ESAGRHLAAH AIMASNTSSI
PITRMAVSSP DPERFIGIHF FNPVPLMKLV EVIPGLATSV PTIEAVRDYV ANIGKEIVLS
QDEPGFIVNR IFVPFINEAA FVLGSGTGSI VDIDKGVKLG LNHPMGPLEL ADFIGLDTLL
EIMKIYLAST GDPKYRPAPL LQKYVEAGWL GRKTGRGFYD YSGEVPVPTR
|
|---|
| |