| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0537 |
|---|
| Symbol | |
|---|
| ID | 3918667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 586351 |
|---|
| End bp | 587277 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640443267 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_495818 |
|---|
| Protein GI | 87198561 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.747405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCA GGCAACTTCG ACAGTTTCTC GCGGTGGCCA ATGCCCGCAG TTTTTCGCGC
GCAGCGGAAA CGCTGAACAT CGCCCAGCCG CCCTTGAGCC GGACGATCCG GCACCTGGAG
GAGGAGATCG GCGGCGCCCT GTTCGACCGC ACCGCCCGCC CGCTGGCGAT GACCCCGCTC
GGGCAGTTGC TGCACGAGCA GGCGCGACAG ATCCTCGATC GCATGGGCGA CATGCACGAC
ATGATGAAGG CCGCCGCCGC GACCGAGCGC CGGCGCTTCA CCATCGGCTT CGTCGCTTCG
ACGATCTATG CGAGGTTACC CGAACTCATT CGCGCCTTTC GCAAGCGCGC GCCCGACGTG
GAACTGACAC TCGTCGAAAG TTCGACGCTC GAACAACTGG CCGCCCTCAA GGATGGCCGC
ATCGATGTCG GCTTCGGTCG CATCCGGTTC GAGGACCCGG CAATCAAGCG CATCATCCTG
CGCAACGAAC GCCTTGCCGT AGCCTTGCCG CGTGACCATC CTCTTGCGCT CGACGATCGG
CCACTCACCC TGAAGCAGGT CGCTGCCGAG CCGCAGATCC TCTATCCGCG CGCTCCGCGT
CCGAGCTATG CCGACCAGGT CATCTCGCTG TTCCGCGATC ACGGCCTCGA ACCCAGAATT
GCCCACGAAG CGCGCGAACT GCAGATCGCC ATCGGCCTGG TCGCGGCCGA GGAAGGCCTT
GCGATCATCC CGGAGTCCAT CAGCCGTTCA AGAAGCCACG ATGTCGTCTA CCGGGAGCTG
GCCGAAGCGG CGACTTCTCC GATCATCATG AGCCACCGGA TGAACGACAG CTCTGCCGAA
CTCCGGCTGA TGGCGCAGGT TATTGCAAGC GAATATGCAG CCTGGGGGTA CCCCGTACCC
GAAATCCTCG CCCACTCCGC CCCCTGA
|
|---|
| Protein sequence | MDLRQLRQFL AVANARSFSR AAETLNIAQP PLSRTIRHLE EEIGGALFDR TARPLAMTPL
GQLLHEQARQ ILDRMGDMHD MMKAAAATER RRFTIGFVAS TIYARLPELI RAFRKRAPDV
ELTLVESSTL EQLAALKDGR IDVGFGRIRF EDPAIKRIIL RNERLAVALP RDHPLALDDR
PLTLKQVAAE PQILYPRAPR PSYADQVISL FRDHGLEPRI AHEARELQIA IGLVAAEEGL
AIIPESISRS RSHDVVYREL AEAATSPIIM SHRMNDSSAE LRLMAQVIAS EYAAWGYPVP
EILAHSAP
|
|---|
| |