| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0535 |
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| Symbol | |
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| ID | 3918665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 582643 |
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| End bp | 585204 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640443265 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_495816 |
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| Protein GI | 87198559 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.445687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCCA GGACCACCGC CGCCGTCTGG CTGGCGGGAG CAGCCATCTG CGGCCTTGCC
GCACCAGCAT TTGCGCAAGG CGCGGAACAG TCGGTCGGCG ATGCTGCCGA GCAAGGCGTC
GGCGAGATCG TCGTGACGGC GCAGAAGCGC TCGGAAAGCC TGCAGCGCAC GCCCATCGCC
ATTTCCGCCA TTCCTGCGGC CCAGCTCGAC CTGCAAGGCA TTGCCGAGGC CAAGGACCTG
TCCGCCATCG CCCCCAACCT TTCGGTCGTC GGCGCTACCA CCAATGCGAC CGCCGCCGTC
ATCAGCATCC GTGGCATTCC GACGTCGGCC GACGAGACCC AGGGCTACGA TTCCTCCATC
GGCGTCTACG TCGACGGGAT CTACATGGCG CGCAGCTCCG CAGCGACTTT CGAGGTTGCC
GATATCGAGC GCGTCGAAGT CCTGCGCGGC CCGCAGGGCA CGTTGTTCGG TCGCAATACG
ACCGGTGGCG CGGTCAATTT CATCACCCGT GCGCCGAGCA GCGAGGCGGG CCTCAGCCTG
CGTGCCGGCA TCGGCAACTA CGACATGCGA ACCGCGCGCG CGGTCTTCAA CACGGGCACT
CTCGCCGATA GCCTGCGCAT GTCCTTCTCG TATCTCTACA AGCAGCGCGA TGGCATCGTC
GACAACCTGC TCGCGGCCGA GAACCGCGAT CCGGGCAGTT CGCTGATCCA CAGCGCACGC
TGGTCGGCGC AGCTCGATCT TGGCGACAGG GTCAAGATCA CCAACATTTT CGACTGGACC
CGCGTCGAGG GCGTGGCCGG CTACCAGCAG CTTTCCGCTG TCGGAAACGG AAATACCACG
GACTTCCCGT CGACCCTTTC GCTCGGCGGA AACGTGTTCC CGGTGGTGCA GCCCGCCAAC
GTCCTTGGCT ACCTCAACGA GGCGACCTCG CTTGATGCGC GCTGCGGCAC TCCCGTCTCG
CAGATCTCGA CGGAGCGTCG CACGCGCGTT TGCAACAATT CCGCCCAGCC CTCGGTCGAC
AAGCTCTGGG GGAACATGAC CAGGGTCGAG GCGGACCTCG ACTGGCTGAC GATCCGGTCG
ACGACTGCGG CGCGCTGGTG GCGCAATCAC ATCGCCGGAA GTGATCTCGA CGGCATGGGC
GCAATCAGCG GTCCGGCATT CAGCCAGGCC AGCCTGCTCA ACGGGATGCC GCTTCAGGTG
TTGGACTTGA TCCCGACGCT GTCGCCTGCC GCAAGAACCG CGCTTGCGGC GGCGCCGGTG
CCGACAACGA CGCAGGATCT CTTCAGCACC CGCAATGATC GACGCCAGAA GCAGTTCAGC
CAGGAATTGG AGTTCGTCTC GAACTCTGGC GGGGCCTTCG AATGGGTCCT TGGTGCCTTC
TACTTCAAGG AGAGCGGCGC GGAGTTCAAT CCGCAGAGCT ATGCCTTCGT GATCGATACC
AACGCGGCGG TGTTCAACGC GGGCAACTTC GGTGCGCTGG CGCCGTTGCT GCAGGCCGGA
AATCCCGCCC GCTACCGCGC GCTCGCCGTG CAGTCGGCGC TTGGATACAC GTCCGACAGC
GAATCCTTTG CAGTCTATGG CCAGGGAACC TTGCGGCCAG GCGGTCCCGA CGGCCGCCTC
GGGATCACGC TCGGCCTCAG GTATTCGTGG GACAGCAAGG ATTTCCAGGT CTACCAGAAC
GGTGCCACCC CCTTCACTGA TGCCCAGTTG CCTAACAACA CAAGCAGCAA GAAGTTCAGC
GCGCCTACCG GCAACCTGAC CGTGGACTAT CGTGCCTCTG ACGATGTGAA CCTCTATGCC
CGCGTCGCGC GCGGCTATCG CTCGGGTGGC TTCAACGCGC GGCAGAACAC CAGCTCGATC
CCTCTCACGC CGTTCAACAA GGAGACGATC TGGTCTTACG AGCTGGGCAT CAAGACACAG
TTCAACAACC GCGTCCGTCT GAATGCCGCA GTGTTCTACA ACGAATACAA GGACCAGCTC
GTGACGCTGC CCGTACCGGT CGGCGAAGGT CAGAGCTTCG GCAACATCAC GGTGAACGCC
GGCAAGACGC GCTATTACGG AGCTGAGATC GAAGGCCGCT TCGTGGTTGA CGATCACCTG
TCGCTGGATG CGGCGGCCGG GTACGTGAAG ACCGATCCGC GCGACTTTCC GGCCGGCGAC
GTCAACAACG TGATCCGCAA TGTCGCATCG ATCCAGCATC TCGGCTACGC GCCTGAATTC
ACGGGCAATG TCGGCGCGAC CTATCGCCGT CCCATCGGCA GCCAGGATCT GACCGCACGC
GTGGGCTACA ACTACACGTC ATCGTTCTGG ATGTTCGGCA ACCCGCTCAC GGCGCCGTTT
GGACGGCAGA CCAAGGGCGA CGCTCGTGGA TTGCTGGATG CGCAGATCCG CCTCGACAGG
ATTGCGATGG GTTCCGCCGA GGCCAGTCTC ACGCTGTGGG GCAAGAACAT CACGAACAAG
TCCTACGTCG TCCGCGCCGT GGACTTCGGC CAGCTCGGCT TTGCGACGAC CATCTATGGC
GACCCGCGGA CCTACGGCTT GACCTTGGAC GTCAAGTTCT AG
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| Protein sequence | MHSRTTAAVW LAGAAICGLA APAFAQGAEQ SVGDAAEQGV GEIVVTAQKR SESLQRTPIA
ISAIPAAQLD LQGIAEAKDL SAIAPNLSVV GATTNATAAV ISIRGIPTSA DETQGYDSSI
GVYVDGIYMA RSSAATFEVA DIERVEVLRG PQGTLFGRNT TGGAVNFITR APSSEAGLSL
RAGIGNYDMR TARAVFNTGT LADSLRMSFS YLYKQRDGIV DNLLAAENRD PGSSLIHSAR
WSAQLDLGDR VKITNIFDWT RVEGVAGYQQ LSAVGNGNTT DFPSTLSLGG NVFPVVQPAN
VLGYLNEATS LDARCGTPVS QISTERRTRV CNNSAQPSVD KLWGNMTRVE ADLDWLTIRS
TTAARWWRNH IAGSDLDGMG AISGPAFSQA SLLNGMPLQV LDLIPTLSPA ARTALAAAPV
PTTTQDLFST RNDRRQKQFS QELEFVSNSG GAFEWVLGAF YFKESGAEFN PQSYAFVIDT
NAAVFNAGNF GALAPLLQAG NPARYRALAV QSALGYTSDS ESFAVYGQGT LRPGGPDGRL
GITLGLRYSW DSKDFQVYQN GATPFTDAQL PNNTSSKKFS APTGNLTVDY RASDDVNLYA
RVARGYRSGG FNARQNTSSI PLTPFNKETI WSYELGIKTQ FNNRVRLNAA VFYNEYKDQL
VTLPVPVGEG QSFGNITVNA GKTRYYGAEI EGRFVVDDHL SLDAAAGYVK TDPRDFPAGD
VNNVIRNVAS IQHLGYAPEF TGNVGATYRR PIGSQDLTAR VGYNYTSSFW MFGNPLTAPF
GRQTKGDARG LLDAQIRLDR IAMGSAEASL TLWGKNITNK SYVVRAVDFG QLGFATTIYG
DPRTYGLTLD VKF
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