Gene Saro_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0472 
Symbol 
ID3918600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp514536 
End bp515204 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID640443201 
Productribosomal RNA methyltransferase RrmJ/FtsJ 
Protein accessionYP_495754 
Protein GI87198497 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTT CCGACAAGAA TCCCCACGAA CGGCTGAAGA CCGCAAAGAA GCGCACGGCC 
TCGTCCGCGC GCTGGCTCTC GCGCCAGCTC AACGATCCCT ACGTGAAGAA GGCCAAGGCC
GAAGGCTGGC GCAGCCGCGC CGCGTTCAAG CTGATCGAAC TGGACGAGAA GTTCGGCCTG
CTGAAAGGCG CGAAGCGCGT GGTCGACCTC GGCATCGCGC CCGGAGGGTG GAGCCAGGTC
GTGCGCAAGA AGGCGCCCGC GGCAAAGATC GTCGGCATCG ACCTCCTGCC CACCGAACCG
ATCGAGGGTG TGACCATCTT CGAGATGGAC TTCATGGCTG ACGAAGCCCC CGAAGCGCTC
CAGAGCGCTC TCGACGGGCC GCCGGACCTC GTCCTCTCCG ACATGGCCGC CAATACCGTG
GGCCACAAGC AGACCGACCA CTTGCGCACG ATGGGCCTGG TCGAGACGGC AGTGGACTTC
GCGGTCCAGA CGCTGGCCCC GGGCGGCGCC TTCGTGGCCA AGGTCTTCGC GGGAGGCACC
GACACCGAAC TCCTGGCGAT TCTCAAGAAG AATTTCACCA CCGTGAAGCA CGCCAAGCCG
CCCGCCAGCC GCAAGGATTC GTCCGAATGG TACGTCATCG CGCAAGGCTT CAAGGGTCGG
CCGGACTAG
 
Protein sequence
MSRSDKNPHE RLKTAKKRTA SSARWLSRQL NDPYVKKAKA EGWRSRAAFK LIELDEKFGL 
LKGAKRVVDL GIAPGGWSQV VRKKAPAAKI VGIDLLPTEP IEGVTIFEMD FMADEAPEAL
QSALDGPPDL VLSDMAANTV GHKQTDHLRT MGLVETAVDF AVQTLAPGGA FVAKVFAGGT
DTELLAILKK NFTTVKHAKP PASRKDSSEW YVIAQGFKGR PD