Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0454 |
Symbol | |
ID | 3918322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 497246 |
End bp | 499669 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640443183 |
Product | TonB-dependent receptor |
Protein accession | YP_495736 |
Protein GI | 87198479 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000638696 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAGT CAACCTACAC TCGTGCTTTG CTGGCAGGCG CCTGCGCGCT CGCCTTCGCG CTGCCCGCGC ATGCGCAGGA CGCAGCCCAG GCCACCGAGG CAGAAGACAC CAACCCCAAC GTCATCATCG TGACCGCGCA GAACCGCGCG CAGAACCTCA ACGACGTTCC GATCAAGATC GACGTCGTCT CCGGCGAGGA GCTGCAGAAG GCTGGCTTTG CCAGCATGAA CGACGTCGGC CAGATCGCGC CGGTCGTGCA GGTCAACCAG GACCAGGGCA CCGTGAAGGT TTCGGTCCGC GGCGTCGGCA CCACCTCGAA TGACGAAGCG CAGGATACTT CGGTCGTCAT CAATATCGAC GGTGAGTACA TCAACCGCCC GAACGTGATG GGCATGGCCC TGTTCGACAT CGACCGGGTC GAAGTGCTGC GCGGTCCCCA GGGTACGCTC TACGGCCGCA ACTCGACCGG CGGTGCAATC AACTTCATCA CCCGCAAGCC CGGCAAGGAA TTCGGGGTCA ACGGCTCGAT CAGCTACGGC AACTACAACG CGATCCGTGC CGATGCCGGT ATTGATCTGC CGCTGGGCGA GATCGCCGGC CTTCGCGTCG CCGGCTTCTA CGATGAGCGC GATGGCTACA GCAAGCACCC CGCAGGCGGT GGCTTCTTCG TGTTCCCGGC CTACGCCGCT GGCCGTTCTG ACGACAACAA GTCGTACGGA GGCCGCGCCT CGCTCCGCCT CGAGCCGACC GATCGTCTCT CGATCAACCT GGCGGCCGAG TATTCGCACC GTAGCTTCAC CCCCGGCATC TTTGCCGCCG GCGACCTGAA CGGTGCCGGC AACGGTCCCA CCGGCGGTGC CTGCAACAAC GGCTTCACCC AGGTTGCACC GGAATATGCG CAAGTGCTCT GCGTTCCCAG CAACACCAAC CTGCTCTCGA AGGTCGACCG CAGCAATTAT GCAGCGCCGC TCTTCGGCAT CGGCCATGTC AGCGATCACA CCTGGGCCGC ACGCGGACGT ATCGAATATG AGCTGAGCGA CGCGGCAACG ATCACCTACA TTGGCGGCTA TCGCAAGTAC TCGGGCGATC CCGGTCGCCT GACTCTGCCG ACGATCTATC AGTCGTTCGG CTACCAGGAT GAAGCCAAGA CGCAGAGCCA CGAACTGCGC ATCAACGGCA CGGTCGGCGG CGTGGTCTAT CAGGTCGGCG GCTTCTACTT CAAGGAAGAC CTGGCCCGCG AAAGCGGCTT CATGCTGCCC AGCTTCGTCT TCGCCGACCC GCTCAATGAT CCCAGCCTGT TCGGCAAGCC GGGCACGTTC CTCAGCTACT TCGGCCGCTA CGTCAAAAGC GACAGCAAAT CGGTCTTCGG TCAGGTCGAG GTTCCGCTGG GCGACAAGCT GACCGCGATC GGTGGCCTGC GCTATACCGA CAACAAGCGC AACGCGACCT ATCTCAACGT CGACCCCTTC CGCTTCAGCC TTGAGACCTT CTCGCTCGTA CCGGACCCGT ACATCGTCGG CGCCGGTCCA GGCCGGAAGG ACTTCAGCAA GGTGATGTAT CTCACCACCA TTCCGCTCAA GAGCAGCGAC AGCAAGGTCA CGTGGCTGGC TGGCCTGAAC TTCAAGCCGA ACAGCGACAC CCTGATCTTC GTCAAGGCGT CGACCGGCTT CAAAGCTGGC GGTTTCGACT CGGTCGGCAC CTACAAGCCC GAGACCAACA CCGCTTTCGA AGGCGGCTGG AAGCAGACCT TCGGTGATCA TGGGCAGCAC CAGTTCAACC TTGGCGCGTT CTACTACGAC TACAAGGACC TGCAGGTTTC CGTACTGCTT GATACCGCCA TCGGCGGCCA GATCTTCAAT GCCGGCAAGG CGAAGATCTG GGGCATCGAA GCCTCGGCCG ACATTGCCCT GGACGATCGC ACCAACTTCC ATGCCTCGGC CAACTACCTG AATGCCGAAT ACAAGGAGCT GCTCGCGCAG TTCAACGTGT TCGACACCAC CGGCGAGATC AACGGCGTTG GCGATCTCGA TCCCAACACC GACGGCATCC AGCAGCCGAA CTTTGCCGGC AACCGCCCGC CGTTCTCTCC GGAATGGGTG CTGACCGCCT CGCTCGACCA CACTTTCCCG CTGGGCGATA TGGGTGGCCT GACGGCGCGG GTGAACACCA CCTTCAAGAG CAAGTACTTC ACCGACTTCT ACAACTATCG CGACGGCACG CAGAGCGCGC TCAGCCAGAC CGACGCGAGC CTCGAATACA AGCCCGAGAA CGAGAAGTTC TCGATCACGG CGTTCGTCAA GAACATCGAA GGCACGCGCC CGCTGACCTA CGGCAGCTTC GTTTCGGCCG GACCGGACGA CATCTTCAAC TGGCAGTTCG GCACGCCGCG CACCTACGGC GTCCGCCTCG CGGTCGACTT CTAA
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Protein sequence | MPKSTYTRAL LAGACALAFA LPAHAQDAAQ ATEAEDTNPN VIIVTAQNRA QNLNDVPIKI DVVSGEELQK AGFASMNDVG QIAPVVQVNQ DQGTVKVSVR GVGTTSNDEA QDTSVVINID GEYINRPNVM GMALFDIDRV EVLRGPQGTL YGRNSTGGAI NFITRKPGKE FGVNGSISYG NYNAIRADAG IDLPLGEIAG LRVAGFYDER DGYSKHPAGG GFFVFPAYAA GRSDDNKSYG GRASLRLEPT DRLSINLAAE YSHRSFTPGI FAAGDLNGAG NGPTGGACNN GFTQVAPEYA QVLCVPSNTN LLSKVDRSNY AAPLFGIGHV SDHTWAARGR IEYELSDAAT ITYIGGYRKY SGDPGRLTLP TIYQSFGYQD EAKTQSHELR INGTVGGVVY QVGGFYFKED LARESGFMLP SFVFADPLND PSLFGKPGTF LSYFGRYVKS DSKSVFGQVE VPLGDKLTAI GGLRYTDNKR NATYLNVDPF RFSLETFSLV PDPYIVGAGP GRKDFSKVMY LTTIPLKSSD SKVTWLAGLN FKPNSDTLIF VKASTGFKAG GFDSVGTYKP ETNTAFEGGW KQTFGDHGQH QFNLGAFYYD YKDLQVSVLL DTAIGGQIFN AGKAKIWGIE ASADIALDDR TNFHASANYL NAEYKELLAQ FNVFDTTGEI NGVGDLDPNT DGIQQPNFAG NRPPFSPEWV LTASLDHTFP LGDMGGLTAR VNTTFKSKYF TDFYNYRDGT QSALSQTDAS LEYKPENEKF SITAFVKNIE GTRPLTYGSF VSAGPDDIFN WQFGTPRTYG VRLAVDF
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