Gene Saro_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0454 
Symbol 
ID3918322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp497246 
End bp499669 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content62% 
IMG OID640443183 
ProductTonB-dependent receptor 
Protein accessionYP_495736 
Protein GI87198479 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 



Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000638696 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAGT CAACCTACAC TCGTGCTTTG CTGGCAGGCG CCTGCGCGCT CGCCTTCGCG 
CTGCCCGCGC ATGCGCAGGA CGCAGCCCAG GCCACCGAGG CAGAAGACAC CAACCCCAAC
GTCATCATCG TGACCGCGCA GAACCGCGCG CAGAACCTCA ACGACGTTCC GATCAAGATC
GACGTCGTCT CCGGCGAGGA GCTGCAGAAG GCTGGCTTTG CCAGCATGAA CGACGTCGGC
CAGATCGCGC CGGTCGTGCA GGTCAACCAG GACCAGGGCA CCGTGAAGGT TTCGGTCCGC
GGCGTCGGCA CCACCTCGAA TGACGAAGCG CAGGATACTT CGGTCGTCAT CAATATCGAC
GGTGAGTACA TCAACCGCCC GAACGTGATG GGCATGGCCC TGTTCGACAT CGACCGGGTC
GAAGTGCTGC GCGGTCCCCA GGGTACGCTC TACGGCCGCA ACTCGACCGG CGGTGCAATC
AACTTCATCA CCCGCAAGCC CGGCAAGGAA TTCGGGGTCA ACGGCTCGAT CAGCTACGGC
AACTACAACG CGATCCGTGC CGATGCCGGT ATTGATCTGC CGCTGGGCGA GATCGCCGGC
CTTCGCGTCG CCGGCTTCTA CGATGAGCGC GATGGCTACA GCAAGCACCC CGCAGGCGGT
GGCTTCTTCG TGTTCCCGGC CTACGCCGCT GGCCGTTCTG ACGACAACAA GTCGTACGGA
GGCCGCGCCT CGCTCCGCCT CGAGCCGACC GATCGTCTCT CGATCAACCT GGCGGCCGAG
TATTCGCACC GTAGCTTCAC CCCCGGCATC TTTGCCGCCG GCGACCTGAA CGGTGCCGGC
AACGGTCCCA CCGGCGGTGC CTGCAACAAC GGCTTCACCC AGGTTGCACC GGAATATGCG
CAAGTGCTCT GCGTTCCCAG CAACACCAAC CTGCTCTCGA AGGTCGACCG CAGCAATTAT
GCAGCGCCGC TCTTCGGCAT CGGCCATGTC AGCGATCACA CCTGGGCCGC ACGCGGACGT
ATCGAATATG AGCTGAGCGA CGCGGCAACG ATCACCTACA TTGGCGGCTA TCGCAAGTAC
TCGGGCGATC CCGGTCGCCT GACTCTGCCG ACGATCTATC AGTCGTTCGG CTACCAGGAT
GAAGCCAAGA CGCAGAGCCA CGAACTGCGC ATCAACGGCA CGGTCGGCGG CGTGGTCTAT
CAGGTCGGCG GCTTCTACTT CAAGGAAGAC CTGGCCCGCG AAAGCGGCTT CATGCTGCCC
AGCTTCGTCT TCGCCGACCC GCTCAATGAT CCCAGCCTGT TCGGCAAGCC GGGCACGTTC
CTCAGCTACT TCGGCCGCTA CGTCAAAAGC GACAGCAAAT CGGTCTTCGG TCAGGTCGAG
GTTCCGCTGG GCGACAAGCT GACCGCGATC GGTGGCCTGC GCTATACCGA CAACAAGCGC
AACGCGACCT ATCTCAACGT CGACCCCTTC CGCTTCAGCC TTGAGACCTT CTCGCTCGTA
CCGGACCCGT ACATCGTCGG CGCCGGTCCA GGCCGGAAGG ACTTCAGCAA GGTGATGTAT
CTCACCACCA TTCCGCTCAA GAGCAGCGAC AGCAAGGTCA CGTGGCTGGC TGGCCTGAAC
TTCAAGCCGA ACAGCGACAC CCTGATCTTC GTCAAGGCGT CGACCGGCTT CAAAGCTGGC
GGTTTCGACT CGGTCGGCAC CTACAAGCCC GAGACCAACA CCGCTTTCGA AGGCGGCTGG
AAGCAGACCT TCGGTGATCA TGGGCAGCAC CAGTTCAACC TTGGCGCGTT CTACTACGAC
TACAAGGACC TGCAGGTTTC CGTACTGCTT GATACCGCCA TCGGCGGCCA GATCTTCAAT
GCCGGCAAGG CGAAGATCTG GGGCATCGAA GCCTCGGCCG ACATTGCCCT GGACGATCGC
ACCAACTTCC ATGCCTCGGC CAACTACCTG AATGCCGAAT ACAAGGAGCT GCTCGCGCAG
TTCAACGTGT TCGACACCAC CGGCGAGATC AACGGCGTTG GCGATCTCGA TCCCAACACC
GACGGCATCC AGCAGCCGAA CTTTGCCGGC AACCGCCCGC CGTTCTCTCC GGAATGGGTG
CTGACCGCCT CGCTCGACCA CACTTTCCCG CTGGGCGATA TGGGTGGCCT GACGGCGCGG
GTGAACACCA CCTTCAAGAG CAAGTACTTC ACCGACTTCT ACAACTATCG CGACGGCACG
CAGAGCGCGC TCAGCCAGAC CGACGCGAGC CTCGAATACA AGCCCGAGAA CGAGAAGTTC
TCGATCACGG CGTTCGTCAA GAACATCGAA GGCACGCGCC CGCTGACCTA CGGCAGCTTC
GTTTCGGCCG GACCGGACGA CATCTTCAAC TGGCAGTTCG GCACGCCGCG CACCTACGGC
GTCCGCCTCG CGGTCGACTT CTAA
 
Protein sequence
MPKSTYTRAL LAGACALAFA LPAHAQDAAQ ATEAEDTNPN VIIVTAQNRA QNLNDVPIKI 
DVVSGEELQK AGFASMNDVG QIAPVVQVNQ DQGTVKVSVR GVGTTSNDEA QDTSVVINID
GEYINRPNVM GMALFDIDRV EVLRGPQGTL YGRNSTGGAI NFITRKPGKE FGVNGSISYG
NYNAIRADAG IDLPLGEIAG LRVAGFYDER DGYSKHPAGG GFFVFPAYAA GRSDDNKSYG
GRASLRLEPT DRLSINLAAE YSHRSFTPGI FAAGDLNGAG NGPTGGACNN GFTQVAPEYA
QVLCVPSNTN LLSKVDRSNY AAPLFGIGHV SDHTWAARGR IEYELSDAAT ITYIGGYRKY
SGDPGRLTLP TIYQSFGYQD EAKTQSHELR INGTVGGVVY QVGGFYFKED LARESGFMLP
SFVFADPLND PSLFGKPGTF LSYFGRYVKS DSKSVFGQVE VPLGDKLTAI GGLRYTDNKR
NATYLNVDPF RFSLETFSLV PDPYIVGAGP GRKDFSKVMY LTTIPLKSSD SKVTWLAGLN
FKPNSDTLIF VKASTGFKAG GFDSVGTYKP ETNTAFEGGW KQTFGDHGQH QFNLGAFYYD
YKDLQVSVLL DTAIGGQIFN AGKAKIWGIE ASADIALDDR TNFHASANYL NAEYKELLAQ
FNVFDTTGEI NGVGDLDPNT DGIQQPNFAG NRPPFSPEWV LTASLDHTFP LGDMGGLTAR
VNTTFKSKYF TDFYNYRDGT QSALSQTDAS LEYKPENEKF SITAFVKNIE GTRPLTYGSF
VSAGPDDIFN WQFGTPRTYG VRLAVDF