| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0453 |
|---|
| Symbol | |
|---|
| ID | 3918321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 495805 |
|---|
| End bp | 496860 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640443182 |
|---|
| Product | xylose isomerase-like TIM barrel |
|---|
| Protein accession | YP_495735 |
|---|
| Protein GI | 87198478 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000058237 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCA TCAAGGGCCC GGGCATCTTC CTCGCCCAGT TCGCCGGCGA CAGCGCGCCG
TTCAACAGCC TCGAGACCAT CGCCGACTGG GCCGCCGGCC TCGGCTACAA GGGCGTCCAG
ATCCCGAGCT GGGACGGTCG CCTGTTCGAC CTCGAAAAGG CCGCGACCAG CAAGGATTAC
TGCGACGAGG TCAAGGGCAT GCTGGCGGCC AAGGGCATCG AGATCACCGA GCTGTCGACT
CACCTGCAGG GCCAGCTCGT GGCCGTGCAC CCTGCCTTCG ACGCGCAGTT CGACGGATTT
GCTCCTGCCT CGGTCCACGG CAATCCCGCC GCGCGGCAGC AATGGGCGGT ACAACAGCTC
AAGTTCGCGG CCCAGGCCAG CCGCAACCTC GGCCTCGCCG CCCATGCCTC GTTCTCGGGC
GCTTTCGCAT GGCCCTACTT CTATCCCTGG CCGGCGCGTC CGGCCGGATT GGTCGAGGAT
GCCTTCGATG AGTTGGCGCG GCGCTGGAAG CCGATCCTCG ACGTCTTCGA CGAGAACGGC
GTCGACGTTG CCTACGAGAT CCATCCGGGC GAGGACCTGC ACGACGGGGT GACCTTCGAG
ATGTTCCTCG AACGCGTCGG CAATCACCCG CGCGCGAACA TCCTCTACGA TCCGAGCCAC
TTCGTGCTGC AGCAGCTCGA TTACCTGGCG TTCATCGACA TCTACCACGA GCGCATCAAG
TGCTTCCACG TGAAGGACGC CGAGTTCCGC CCCAACGGTC GCTCGGGCGT CTATGGTGGC
TACCAGTCCT GGGTGGACCG GCCGGGCCGC TTCCGCAGCC TGGGTGACGG TCAGGTCGAT
TTCGCCGCGA TTTTCAGCAA GATGGCCGCC AACGACTATG CCGGCTGGGC CGTTCTCGAA
TGGGAATGCG CGCTCAAGCA TCCCGAGGTC GGCGCGGCCG AAGGCGCGCC CTTCATAGAT
CGCCACATCA TCAGGGTCAC CGAACACGCC TTCGACGATT TCGCCGCGGG CGGAGCTGAC
CGGGCGCTCA ACGCAAGGCT CATGGGCATC GGCTGA
|
|---|
| Protein sequence | MKTIKGPGIF LAQFAGDSAP FNSLETIADW AAGLGYKGVQ IPSWDGRLFD LEKAATSKDY
CDEVKGMLAA KGIEITELST HLQGQLVAVH PAFDAQFDGF APASVHGNPA ARQQWAVQQL
KFAAQASRNL GLAAHASFSG AFAWPYFYPW PARPAGLVED AFDELARRWK PILDVFDENG
VDVAYEIHPG EDLHDGVTFE MFLERVGNHP RANILYDPSH FVLQQLDYLA FIDIYHERIK
CFHVKDAEFR PNGRSGVYGG YQSWVDRPGR FRSLGDGQVD FAAIFSKMAA NDYAGWAVLE
WECALKHPEV GAAEGAPFID RHIIRVTEHA FDDFAAGGAD RALNARLMGI G
|
|---|
| |