| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0446 |
|---|
| Symbol | |
|---|
| ID | 3918314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 489185 |
|---|
| End bp | 490354 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640443175 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_495728 |
|---|
| Protein GI | 87198471 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.317433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGC TCTCCCGGGC GCTTGCGCGC ATCGCTCCTT CCCGTACCAC CGCTATCACC
GACCGCGCGA TCCAGCTTCG CGCCGAAGGC CGCGACGTGA TCTCGCTCTC GGTGGGCGAG
CCTGATTTCG CCACGCCCGC GCACGTCGTC CAGGCCACCA AGGACGCGCT CGACGCAGGC
GACACCAAGT ATACCGCCGT CGTGGGCACA GCCGCCCTGC GCAGCGCCGC CGCGCTGCAC
TTCAGCCGTG ACCTCGGCCT GGAAGTCCCG CCCTCGCAGG TGATCGTCAG TGCCGGCGGC
AAGCAGGCGA TCTTCCACGC CCTTCTCGCC ACGCTCGATC CCGGCGACGA AGTACTGATC
CCCAGCCCCT GGTGGGTCAG CTACCCTGAA ATCGTGCGTT TCGCCGGAGC AGAGGTCGTG
GACCTGCCGA CCGACGCCGC AGGCGGTTTC CGCATTACGG CCGCGCAACT CGAGGCCGCA
ATCACCCCCG CCACCCGCTG GCTGCTGCTT AACAGCCCCG GCAACCCCAC TGGCGCCACC
TATCCGGCGC AGGAACTGCG CGCGCTGGGC GAGGTTCTGC GCCGTCATCC CCGCGTGCTG
GTGATGAGCG ACGACATCTA TGCGCCCCTG CGTTACGGCG AGGGCCGCCA CGCCACGCTG
GCGGTGGAGT GCCCCGATCT CGCGGATCGC ATCCTGACCG TCTCCGGCGT TTCGAAAAGC
CACGCGATGA CCGGTTTCCG GATCGGCGTC GCCGCCGGCC CCGCATGGCT GATCTCTGCG
ATGGGCCGCC TGCAATCGCA TTCCTCGGGC AACCCTGCCT CGATAAGCCA GGCCGCTGCG
GTCGCCGCGT TCGAAGGCCC GCAGGACTTC CTGCTGGACT GGCGCGAGCG CTTCCGTGCG
CGCCGGGACA TGGTCTGCGC GCGCGTTAAC GCGATCCCCG GCCTGTCCAC GCCTGTTCCC
GATGGCGCCT TCTACTGTAT GGTCGATGCT GCGCCGTTGA TGGCGCGCTT CGGCGATGAC
GAAGCGCTCT GCCTCCATCT GTTGGAAAGC GGCGTGGCCG TGGTGCCGGC ATCCGCGTTC
GGCGGAAGGG ACGGCTTCCG CATCAGCTTC GCGGCGGACG AGGCGAAACT CGAAGAAGCG
CTGCGGCGTA TAGAAAAGGC CGTTGCATGA
|
|---|
| Protein sequence | MNQLSRALAR IAPSRTTAIT DRAIQLRAEG RDVISLSVGE PDFATPAHVV QATKDALDAG
DTKYTAVVGT AALRSAAALH FSRDLGLEVP PSQVIVSAGG KQAIFHALLA TLDPGDEVLI
PSPWWVSYPE IVRFAGAEVV DLPTDAAGGF RITAAQLEAA ITPATRWLLL NSPGNPTGAT
YPAQELRALG EVLRRHPRVL VMSDDIYAPL RYGEGRHATL AVECPDLADR ILTVSGVSKS
HAMTGFRIGV AAGPAWLISA MGRLQSHSSG NPASISQAAA VAAFEGPQDF LLDWRERFRA
RRDMVCARVN AIPGLSTPVP DGAFYCMVDA APLMARFGDD EALCLHLLES GVAVVPASAF
GGRDGFRISF AADEAKLEEA LRRIEKAVA
|
|---|
| |