Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0437 |
Symbol | |
ID | 3917583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 475412 |
End bp | 477487 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640443166 |
Product | oligopeptidase B |
Protein accession | YP_495719 |
Protein GI | 87198462 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1770] Protease II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.365567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCGAA TGACTCTTGC CACTCCTCCC GTCGCGGCAA GGAAGCCGCA CAGCTTCTCG CACCACGGCC TGACCGTTTC CGACGACTAT TTCTGGCTGC GCGATCCCGG CTATCCGGAC GTGACCGACA AGGACGTGCT GGCCCATCTG GAAGCCGAGA ACGCCTGGTT CGAGACGCGC ATGGCCGCGC AGAAGCCGGT GATCGACAAG CTGTTCAAGG AAATGCGCGG GAGGATCAAG GAAGCGGACA AGTCCGTGCC GCAGAAGGAC GGCAATTTCC TCTACTGGAT CGAGTACGAG GACGGCGCCG AATACAAGAA GTGGTGGCGC CGCCCGGTCG GTGCGCCCGA TGACGGCAGC GCCGACGAAC TGATCCTCGA CGAAGTGGCG CTGGCCGAGG GCAAGGAATA CTTCCGCCTC GGCGCCATCG CGGTCTCCAA CGACGGAACG CGCCTCGCCT GGTCGGTTGA CGACAACGGA TCGGAGCGCT TCACCGCGCG GATCAAGGTC ATCGCCACCG GCGAGATCCT GCCCGACGAG ATTCCGGGCA CGCTGTCAGG CCTGATCTGG GTGAAGAACG ACACCGGGCT CGTCTATTCG CTCGCCAACG AGAACTGGCG CACCGACAAT GCGCGGCTGC ACTGGATCGG CCAGCCGCTG GAAAGCGACG TGGAACTCTA TCATGAGGAC GATGAAGGGT TTCGCGTCAG TGCGGCGCTT TCGGCCAACG AGAAGTGGCT CATCATCGCC ACCGGCGACC ACGAGACCGG CGAGGTTCGC CTCGTGCCCG CCAACGACCC GCTGGCGCCG CCGCTGCTGG TCAAGCCCCG GCAGAGAGGC GTCGAGTACG ACGTGGATGA GCGCGAGGGC GTGCTCTACA TCCATACCAA CGACACCCAC GAGAATTTCC GCCTCGCCAC TGCGCCGCTC TCTGACCCGG GCAACTGGAC GACGCTGATC GAGGGCACGC AGGACTTCTA CCTGACCGGG TTCGAGCTGT TCCGCGACTT CTACATCGTG GAAGGTCGCG TTCGCGGCCT CGATCGCATC GAGGTGCGCT ACTACGATGA TCCGACCAGG ATCGAGCCCA TCGAATTTCC CGAGGCGAGC TACGAAGCCT CGCTGGGCGA CAATCCCGAA TGGGCGATGC AGGTGCTGCG GGTCGGCTAC GAATCGATGG TCAGCCCTTC GTCCGTATTC GACTACGACG TCGCAACCCG GCACCTGACG CTGCTCAAGG TGCAGGAAAT CCCGAGTGGC TACGACGCCT CGCTCTACGA GACGACCCGA CTGGAGATCG CGGCGCGCGA CGGCACGATG GTCCCGGTCA GCGTGGTCTG GCGCAAGGAT CGTCAGCCGG GCGGGCCGCT GCATCTCTAT GGCTACGGCG CCTATGGCAT CGCCATCGGC CCAGGCTTCT CGACCACCCG CCTCAGCCTG GTCGACCGGG GCTTCGCCTA TGCCATCGCC CATATCCGCG GCGGCGACGA CCTTGGCCGG GCATGGTACA AGGCCGGCAA GCTCGAGGCG CGGACCAACA CGTTCAACGA CTTCGTCGAC GTGGCGAAAG GCCTGATCGA GCGCGGCTTC ACCGAGGCCG GAAAAATCAG CATCTCGGGC GGATCGGCCG GCGGCGAGCT GATGGGCGCG GTGATCAATT CCGACCCCGA CCTGTGGGGC GCGGTCGTGG CGCACGTTCC CTTCGTCGAT GTCCTTGCGA CCATGCTCGA CGAGGATCTC CCGCTGACCC CGGGCGAATG GCCGGAATGG GGCAACCCGA TCGAGGACAA GGCGGCTTTC GAACTGATCC GGTCCTACTC GCCCTACGAT CAGGTCAAGC CGCAGGCCTA TCCGCCACTC ATGGTCACCG CCGGGCTGAA TGACCCGCGC GTGACCTACT GGGAGCCGGC CAAGTGGGTG GCGAGGCTGC GCGAGCTGAA GACCGACGAG AACGAGCTGA TCCTCAAGAC CAACATGGGC GCGGGCCACG GCGGCAAGTC GGGCCGGTTC GAGAGCCTGA AGGAGACGGC GGAGGAATTC GCCTTCATCC TGTGGCAACT GGGCGTCGCG GCGTGA
|
Protein sequence | MQRMTLATPP VAARKPHSFS HHGLTVSDDY FWLRDPGYPD VTDKDVLAHL EAENAWFETR MAAQKPVIDK LFKEMRGRIK EADKSVPQKD GNFLYWIEYE DGAEYKKWWR RPVGAPDDGS ADELILDEVA LAEGKEYFRL GAIAVSNDGT RLAWSVDDNG SERFTARIKV IATGEILPDE IPGTLSGLIW VKNDTGLVYS LANENWRTDN ARLHWIGQPL ESDVELYHED DEGFRVSAAL SANEKWLIIA TGDHETGEVR LVPANDPLAP PLLVKPRQRG VEYDVDEREG VLYIHTNDTH ENFRLATAPL SDPGNWTTLI EGTQDFYLTG FELFRDFYIV EGRVRGLDRI EVRYYDDPTR IEPIEFPEAS YEASLGDNPE WAMQVLRVGY ESMVSPSSVF DYDVATRHLT LLKVQEIPSG YDASLYETTR LEIAARDGTM VPVSVVWRKD RQPGGPLHLY GYGAYGIAIG PGFSTTRLSL VDRGFAYAIA HIRGGDDLGR AWYKAGKLEA RTNTFNDFVD VAKGLIERGF TEAGKISISG GSAGGELMGA VINSDPDLWG AVVAHVPFVD VLATMLDEDL PLTPGEWPEW GNPIEDKAAF ELIRSYSPYD QVKPQAYPPL MVTAGLNDPR VTYWEPAKWV ARLRELKTDE NELILKTNMG AGHGGKSGRF ESLKETAEEF AFILWQLGVA A
|
| |