Gene Saro_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0407 
Symbol 
ID3917553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp446037 
End bp447314 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content61% 
IMG OID640443136 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_495689 
Protein GI87198432 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCGA TTTCTCACCC TCCTTCAGCT CTGCGTGACT TCCTGCGGAG TGAAGCAGCG 
GGTGGCGTCA TTCTGATGGC CGTGGCCGTG CTGGCCATGA TTGTTGCGAA CAGCCCGCTC
GCCGACAGCT ATTTCCATCT CCTGCACGTG CAGACCGGGC CAGTGCTCAG CGAGAAGTTG
GGGCCGATGA CGCCTCACCT CTGGATCAAC GATGCGCTGA TGGCGGTTTT CTTCCTGCTC
GTCGGCCTGG AGATCAAGCG TGAGTTCGTC GATGGTCGTC TCGTGACCTG GCAGCAGCGC
CGGTTGCCCT TCATTGCTGC TCTGGGTGGC ATGGCTGCGC CAGCACTGGT GTTCCTGGCT
GTCACGGCAC AATCGTCCGG CCTCACCCAG GGCTGGGCTA TCCCGGCCGC AACCGACATT
GCGTTTGCCA TCGGAGTGAT GGCCTTGCTG GGCAGCCGCG TTCCCACGGC CCTCAAACTG
TTCCTGACCA CCGTCGCGAT CGTTGATGAC ATGGGCGCAG TCGTCATCAT CGCACTTGCC
TACACCGCGA GCATCAAAGG CATCGCGCTG TTGGCAGCGG CCGTCATCCT TGGCGCCATG
ATGGCAATGA ACCGGGCAGG CGTACGCCAT CTGGCGCCGT ACCTCCTGGG CTTCGTCCTT
CTTTGGTTCG CTGTGCTGGT CTCTGGCGTC CACGCCACGA TTGCAGGTGT CCTGGCAGCC
TTCACCGTGC CCGTGGTGGC AACCCCAGGA GCGCCAGATT CTCCAGATTC CCCGTTGCAT
AGGCTTGAGC ACGCGCTCCA TCCTTGGTCT GCCTTCCTGA TCGTGCCCTT GTTCGGCTTT
GCCAACGCAG GAATCTCACT GGAGGGCTTC AGCCTCGGCA GCCTGCTGGA GCCGCTGCCC
CTGGGCATCG CTGCTGGCCT GTTCATTGGC AAGCAGCTCG GTATTTTCTC CTTGATCTGG
GCTGCAGTGA AACTCGGCAT CGCCCAACGC CCGCGCGGAT CGACCTGGTT GCAGGTCTAT
GGTCTCTCAG TGTTGTGCGG CATTGGTTTC ACCATGAGCC TATTCATCGG AATGCTTGCC
TTCGCCTCGT CACCAGACCT GATCGAGGAA GCCAAGCTCG GGGTGATAAC GGGCTCGCTG
CTTTCCGGCG TGCTAGGTTA CCTTGTCCTT CGGTTTGCGC CCCCAGCGGC CGACGCCGCC
CAGGCCGAGA CTGAAATCGA TCGCGAAATT GAACAGGACG GCGATGTCGA GGCGATCGAA
GGCAAGCTGC GGCAATAA
 
Protein sequence
MPSISHPPSA LRDFLRSEAA GGVILMAVAV LAMIVANSPL ADSYFHLLHV QTGPVLSEKL 
GPMTPHLWIN DALMAVFFLL VGLEIKREFV DGRLVTWQQR RLPFIAALGG MAAPALVFLA
VTAQSSGLTQ GWAIPAATDI AFAIGVMALL GSRVPTALKL FLTTVAIVDD MGAVVIIALA
YTASIKGIAL LAAAVILGAM MAMNRAGVRH LAPYLLGFVL LWFAVLVSGV HATIAGVLAA
FTVPVVATPG APDSPDSPLH RLEHALHPWS AFLIVPLFGF ANAGISLEGF SLGSLLEPLP
LGIAAGLFIG KQLGIFSLIW AAVKLGIAQR PRGSTWLQVY GLSVLCGIGF TMSLFIGMLA
FASSPDLIEE AKLGVITGSL LSGVLGYLVL RFAPPAADAA QAETEIDREI EQDGDVEAIE
GKLRQ