| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0393 |
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| Symbol | tolB |
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| ID | 3918277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 429429 |
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| End bp | 430784 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640443122 |
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| Product | translocation protein TolB |
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| Protein accession | YP_495675 |
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| Protein GI | 87198418 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTGC GCATGCTGTT CGCCTTCGCC TTGCTCGCCG CCGCCCCTGC ACAGGCGCAG
CAGACCGAGC CGCAACCGGC CGAAGAAGGC GGGCTTTCCG GTACGGTGTC GGATGACAGC
GAGTGGCAGG ATCTCGGGAT CGCGATCCCG GCCTTTGCGA CCAACGCCGA TGTGCCGACG
CCGACCAGCG CAGGGTCGAC GTCAGCATTG GGCCAGGCGC TCGCCCAGGT GATCAGCGCC
AACCTCAGGA ACAACGGGCT ATTCAAGCCG GTCGGGCCTG AAAGCCTGCC AAGGCCCGGT
TTCGAACAGG TTCAGGCTCC CGATTTCGCG GTGTGGTCCG CTCGCAGCGC GGAGATGCTC
GTCCAGGGCT ATGTGCGAGC CAACGGGGAT GGGCAACTGA CGGTTGGATG CTACCTCTAT
GACGTTGCGT TAAAGCAGCA ACTCGAGAAA GCGGGCTGGA CCGTTGCCCC TGCGGACTGG
CGCCGTGCGG CGCACAAGTG CGCGGACATG ATCTATGCCC GCCTCTCGGG CGAGAGCCCT
TTCTTCGATA GCCGCGTTGC TTACATCGCT GAGTCCGGTC CCAAGGATCG CCGCATGAAG
CGCCTGGCCA TCATGGATTC GGACGGGGCC AACCACCGCT ATCTGACGAG TGGGCAGGCA
ACTGCACTGA CCCCGCGCTT TTCGCCGGAT TACAAGTCGA TCCTGTATCT GTCGTATCTC
AACGGTCGCC CGCGCATCTA TGTCTATGAT CTGGCGGCCA ATACCCAGCG CCTCGTGACG
GAAACGCCAG GTCCCACCTT CGCCCCGCGC TGGTCGCCCG ACGGCAAGTG GATCCTCTAT
TCGATGGCGA CTGCTGGCAA TACCGACATC TACAAGGTGC CGGCGAGCGG CGGGGCCAGT
CAGCGCCTTA CCGACACCCC GGGAATCGAT GTCGGCGGCA GCTTCTCCCC CGACGGGTCG
AGGATCGTCT TCGAAAGCGA TCGGTCCGGC AGCCAGCAAA TCTACGTGAT GAACGCCGAT
GGTTCCGACC ATCGGCGCAT CAGCTTCTTC GGCGGGCGCG CCGCGACACC GGAATGGAGC
CCGCGCGGTG ACCAGATCGC ATTTACGCAC ATAGTCGGCA ATTTGCGCAT AGCCGTCGTG
AGCCCCGGTG GAGGGGACCT GCGTTATCTG ACGGATAGCT GGCAGGATGA GGCGCCAACC
TGGTCACCCA ATGGCCGGAT CATCCAGTTT TTCCGCACCG AGAAGGGCTC AGGCAAGGCC
AGTGTCTGGC AGGTCGATCT TACCGGTCGC AACGAGCGGC GCTTGTCGAC GCCGGGCGAC
GCCTCCGACC CTGCCTGGGG ACCGTTGTTG CCGTGA
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| Protein sequence | MTLRMLFAFA LLAAAPAQAQ QTEPQPAEEG GLSGTVSDDS EWQDLGIAIP AFATNADVPT
PTSAGSTSAL GQALAQVISA NLRNNGLFKP VGPESLPRPG FEQVQAPDFA VWSARSAEML
VQGYVRANGD GQLTVGCYLY DVALKQQLEK AGWTVAPADW RRAAHKCADM IYARLSGESP
FFDSRVAYIA ESGPKDRRMK RLAIMDSDGA NHRYLTSGQA TALTPRFSPD YKSILYLSYL
NGRPRIYVYD LAANTQRLVT ETPGPTFAPR WSPDGKWILY SMATAGNTDI YKVPASGGAS
QRLTDTPGID VGGSFSPDGS RIVFESDRSG SQQIYVMNAD GSDHRRISFF GGRAATPEWS
PRGDQIAFTH IVGNLRIAVV SPGGGDLRYL TDSWQDEAPT WSPNGRIIQF FRTEKGSGKA
SVWQVDLTGR NERRLSTPGD ASDPAWGPLL P
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