Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0390 |
Symbol | |
ID | 3918274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 427167 |
End bp | 427850 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640443119 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_495672 |
Protein GI | 87198415 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein [TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACCG ACGCTGTTAC CGACTTCTCC CCGATCGCGC TGTTCGCGCA GGCCGACATC GTCGTCAAAG TGATCATGCT CGGCCTTTTG GCAGCCAGCA TCTGGACCTG GGCGATCATC GTTGCCCAGA TCCTCAAGAA CCGCAGGGCG CACGCGACAA GCGACCTGTT CGAGGCCGAG ATCAGGGAAG CGGGATTTAC CGGCGAAAGC AGCAAGCACC TCGCCCGCGA TGCTTCTCCT GCAGCCGCCC TGTTCAAGGC CGCGATGGCT GAATGGAGCA AGTCGGTCCG GGCCAGGGCC AGCCTCGACA AGGACGCGGC CCGCGAGCGG ATCGCCGACG TGCTCGAGGG CGCGATCGAG GGGGAAGTCG ATCGCCTGTC CGAACGACTC AACTACCTGG CGACCATCGG CTCCATCGCG CCCTTCGTCG GGCTGTTCGG GACGGTCTGG GGCATCATGC GCAGCTTCAC CTCGATCGCG GCATCGCAGA ACACCTCGCT CTCGGTGGTC GCGCCGGGCA TCGCCGAAGC CTTGCTCGCG ACAGCCATCG GTCTGTTTGC TGCGATCCCC GCCGTTATTG CCTACAATCG GTTTGGTCAC AGCTTGAACC GCTTTGAAGC GCGGCTGGTA CGCTTCGCCC GATACCTGCG CGGCAATCTC AGCCGCGAAC TGGACGCGCT CTGA
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Protein sequence | MTTDAVTDFS PIALFAQADI VVKVIMLGLL AASIWTWAII VAQILKNRRA HATSDLFEAE IREAGFTGES SKHLARDASP AAALFKAAMA EWSKSVRARA SLDKDAARER IADVLEGAIE GEVDRLSERL NYLATIGSIA PFVGLFGTVW GIMRSFTSIA ASQNTSLSVV APGIAEALLA TAIGLFAAIP AVIAYNRFGH SLNRFEARLV RFARYLRGNL SRELDAL
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