Gene Saro_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0390 
Symbol 
ID3918274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp427167 
End bp427850 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content64% 
IMG OID640443119 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_495672 
Protein GI87198415 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein
[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCG ACGCTGTTAC CGACTTCTCC CCGATCGCGC TGTTCGCGCA GGCCGACATC 
GTCGTCAAAG TGATCATGCT CGGCCTTTTG GCAGCCAGCA TCTGGACCTG GGCGATCATC
GTTGCCCAGA TCCTCAAGAA CCGCAGGGCG CACGCGACAA GCGACCTGTT CGAGGCCGAG
ATCAGGGAAG CGGGATTTAC CGGCGAAAGC AGCAAGCACC TCGCCCGCGA TGCTTCTCCT
GCAGCCGCCC TGTTCAAGGC CGCGATGGCT GAATGGAGCA AGTCGGTCCG GGCCAGGGCC
AGCCTCGACA AGGACGCGGC CCGCGAGCGG ATCGCCGACG TGCTCGAGGG CGCGATCGAG
GGGGAAGTCG ATCGCCTGTC CGAACGACTC AACTACCTGG CGACCATCGG CTCCATCGCG
CCCTTCGTCG GGCTGTTCGG GACGGTCTGG GGCATCATGC GCAGCTTCAC CTCGATCGCG
GCATCGCAGA ACACCTCGCT CTCGGTGGTC GCGCCGGGCA TCGCCGAAGC CTTGCTCGCG
ACAGCCATCG GTCTGTTTGC TGCGATCCCC GCCGTTATTG CCTACAATCG GTTTGGTCAC
AGCTTGAACC GCTTTGAAGC GCGGCTGGTA CGCTTCGCCC GATACCTGCG CGGCAATCTC
AGCCGCGAAC TGGACGCGCT CTGA
 
Protein sequence
MTTDAVTDFS PIALFAQADI VVKVIMLGLL AASIWTWAII VAQILKNRRA HATSDLFEAE 
IREAGFTGES SKHLARDASP AAALFKAAMA EWSKSVRARA SLDKDAARER IADVLEGAIE
GEVDRLSERL NYLATIGSIA PFVGLFGTVW GIMRSFTSIA ASQNTSLSVV APGIAEALLA
TAIGLFAAIP AVIAYNRFGH SLNRFEARLV RFARYLRGNL SRELDAL