| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0362 |
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| Symbol | |
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| ID | 3918246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 398177 |
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| End bp | 398755 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640443091 |
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| Product | conjugal transfer protein precursor |
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| Protein accession | YP_495644 |
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| Protein GI | 87198387 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCGGC GCACCATCAT TGTCGCCGCC CTCGCAGCGG GGCTCGCGAT GGCATCGCTG
GCACTCCCGG CGCGTCGTCC GCTGGTCTGG AACGTCACTC ATTCGGTGCC GACCGGGCTC
TACTGGATCG GCGACAAAGA CGCGCTGGCG GTCGGCGACC GGGTCGCGAT CGAGCCGCCT
GCTGCTGTCC GGCAATTGCT GGCCGACCGC GGCTATCTGC CAATCGGCGT GCCACTCCTG
AAGCGCGTGG CCGCCGTTTC CGGTCAGCGC GTCTGCCGCT TCCGGCACGG CATCACCATC
GACAGCCAGC TTGTCGCCCT CGCGCTCGCC AGCGACCGGC TCGGTCGTCC GTTGCCTGCC
TGGAACGGCT GCAATGTGCT CGGCCCCGGT GAGATCTTCA CGCTGAACCC GGGCGAACCA
GCGAGCTTCG ACGGGCGCTA CTTCGGCTCC TTGCCGGTCA ATGCCGTGAT CGGCCGGGCC
ATTCCGGTCT GGACCGACGA ACGCGGCGAT GGCCGCCGCG AGTGGTTCGC CGACGCCCGG
ACTCCCCTTT GCCCACCACC AACCAAGGAG AATGAATGA
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| Protein sequence | MRRRTIIVAA LAAGLAMASL ALPARRPLVW NVTHSVPTGL YWIGDKDALA VGDRVAIEPP
AAVRQLLADR GYLPIGVPLL KRVAAVSGQR VCRFRHGITI DSQLVALALA SDRLGRPLPA
WNGCNVLGPG EIFTLNPGEP ASFDGRYFGS LPVNAVIGRA IPVWTDERGD GRREWFADAR
TPLCPPPTKE NE
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