| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0352 |
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| Symbol | |
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| ID | 3918236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 379978 |
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| End bp | 385092 |
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| Gene Length | 5115 bp |
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| Protein Length | 1704 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640443081 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_495634 |
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| Protein GI | 87198377 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTTT TCGAACTCGA TGCTGATCTG ATTGCCAGAT ACGAGAAGTT CGCGCGTTCG
TTCACCTCGA TCCGTGCTGA AGATCTGCGA GGCCAGATCG ATGCCGTCTA TGAAGGTGGA
AAATTCTGGC CCGAGCCGCT GATCGGGCTC AACCCGGAGT TCAAGCGCGG TCGCTCGGTC
GCCGATCTTG CCCGGCAAGG GGTGGTCGAC CCCGATCTTG AGACCGTCTT CGCACTCGGT
ACTCCCCGCA CGCCGATCAG CTTGCACCTG CATCAGGAGC AGGCGCTCAT GAAGGCGCTG
CAAAGCCGCA ACTACATCGT CACGACCGGC ACGGGCTCGG GCAAATCGCT CTGCTTCTTC
GTGCCGATCA TCAATCGGAT CCTTGCCGCA CGACGAGCGG GCGAACCGCG CCGGACAAGA
GCGATTGTCA TCTATCCGAT GAACGCGCTG GCCAATTCAC AGCGCGAGGA GCTCGAGAAA
TTCATCGAAC ATTGCGGCTT GGACTCCAGC CTGAAGCCAA CCTTTGCGCG TTACACCGGT
CAGGAACAGG ACAGCGAGCG CAAGGCGGTG GCTGCCAACG CGCCGGATAT CATCCTGACC
AACTTTATGA TGCTCGAGCT GCTGATGACG CGGCAAGATG AGGTCGATCG GCAGGTCATC
GAGAATATGA AGGGGCTCGA GTTCCTTGTT CTCGACGAGC TTCACACCTA TCGCGGCCGT
CAGGGTGCCG ACGTTGCCAT GCTTGTTCGT CGCGTGCGCG AGCGCATGGG CTCCGAGAAG
ATGCTGTGTG TCGGCACTTC AGCCACAATG GCGTCCGGCG AGGAAGATGC CGGGCGGGAT
GCTGTCTCAA AGGTCGGAAG CATCCTATTT GGAAGCCCTG TCCTCTCCGA AGACGTGATC
ACGGAAAGCC TCGTTCGTCG CACTGAAGGC ACGCCATCCG ATGCCGCTTT GCGAGCGGCC
GTTCTGGAAC CATCCAAGCC TGCGACCTTC GAAGAGTTCG CTCTTGATCC ACTCGCTTGC
TGGATCGAGA TGAATATCGG ACTTGATGGC GGCGAAGTGC TGAAGCGTGC GACCCCGCGC
ACGTTAACCG AGGCAGCGGA TTCCCTTGCG CAAGCCACAC AACTGGAGCC AGCGGAGTGC
CGCTCCGCTC TGGCTGACAG GCTGATAGCC ATGAATGAAT GTCGCAATGA CCGCGACCAG
GCCTTCATGG CGTTCAAGCT CCATCGTTTC TTGTCCGGTG CGGGTACTGC GCATACGACG
CTGGCGCCAT CCGGTAGCCG CCGTGTGTCA CTGGTTGGTG AGAAATTCGA CCGGGAGGAA
ACTGAGGCCC GGCTCTATCC CGTCTATTTC TGCCGAGATT GCGGTCAGGA AGTCCATAGC
GTCTCGATCG ACAACTGGGG CAGTGTCATC GCTCGCCCTA TCGACGTCGC GCCCCGTCCT
GACGGAACAG ACGGAGACAT CGAACACGGC TTTCTCGTGC CCGATTCGAG CGGCGATCTC
AATTTTGCGG GCGATGTCGA AGATTATCCC GACAGCTGGC AGGAGACCAG CGCAACAGGG
CAGCTTCGTC TCAAGAACTC CCATCGCGGC AAACACGATG GCCGCCGGAT GTACCTTGGC
CGGGACGGGC GGCATGACCC GGAAGGGCTG CTATGCTGGT TCTTCCCTGG TCAGTTTCGT
TTCTGCCCGC ACTGCAAGAG CCAGCCCGCG CCGCAAGCAC GCGATATCAA CAAACTGGCG
GGGCTTTCGG CCGAAGGCAG GAGCTCCGCG ACGACGCTCA TCACAACGGC AGCGCTGGAC
TGGATGGAGC GGGCGGGTCA ACCGGTCGAG ATTCATCGCC GCAAACTGCT CGGCTTCACC
GATAATCGGC AGGACGCAGC GCTTCAGTCG GGTCATTTCA ACGACTTCAT CTTCGTCACA
TTGCTGCGCG GCGCCATGCT GCAGGCGGTA AGGTCCGCGG GCGAAGATGG CCTCTCCCAC
GAGGAATTCG GGAATGCGCT CCGCAAAGCA CTCGGCTTCG ATCCCGATCT GCGGGAGCGC
CGGACAGAGT GGATGCTCGA TCCGGAACCC GTGAGCTTTT CCGCAATCGA CGAAGCTAAG
AAGTCGATCA ACAGGGTGCT AGCACATCGG CTTTGGAATG ACCTGCGCAG AGGGTGGCGC
TTTACCAACC CGAATCTCGA CCAACTCGAT CTGATCAAGA TCGTCTATCC CGGGATCCGG
ATGTTGGCCG GGGATCAGGC AACATGCTCG GGCGCGCACC GCGAGCGCAT GAGCGAAACC
GAAGAACGCG GCTTCTCGAT ACTGTCGCAA GTTCCGGCAG ACAAACGCGA GAAGATGTTT
CGCCAGCTGT TTGACCATAT GCGCCAGGGC TTGGCGATCG CGGTCGATGC ACTCGATCCT
AATGAACTCG AAGCGGTGTC GATCAAGTCG CGGCAGTTCC TCAAAGACCC CTGGGCCATC
TCGCAAGAGG AGCAGAATCA CGACCTCAGC GCGCAGACTG CGCTGGTCGT GGGCACGCAA
GGCAGCAAGA ACGACCGCAT CGTCCGCGTT TCGGCGCGCG GTGGTCTGGC GCGGGCGATT
GTGGCTGAGG TTGGTGACCT CCCCCTCGCT GATCGCGAGC CACTGATCGA GGCGATGCTG
CTGGCAGCCG CGCGGCATCA GATGGCGCGC GAGTTTGCGG CCGGTCCGCT TCTAGGCTGG
AGGCTTGCCC CAGGCGCCCT TCGAATTGTA CCAGGCGATG GGCGGCCCAA GAAGGGCCAA
GACAACCGTT TCTTCGCTGA GCTCTACTCC GATGTTGCCG TTCGGCTTGC GGCACCCGGA
GGGTTGCCCT TGGCCTTCGA AGCACGTGAG CACACCGCAC AGGTCGATTC CTTGCTCCGC
GAAATGCGCG AATGTCGTTT TCGCTTCGGC AACAGCGACA AACAGCGCAT GGCCGAGATC
GCCAACGATG CCAAAGTAAT CGCAGAAAAG CGGGATTTCC TGCCGCTGCT CTATTGCTCG
CCGACCATGG AGCTGGGCGT CGATATCTCG CAGCTCAACG TCGTCTATCT GCGCAATGCA
CCTCCGACCC CGGCCAATTA CGCCCAGCGT GCGGGGCGGG CTGGCCGAAG CGGCCAAGCC
GCCCTGGTCG TGACCTACTG CGCTGCGCAA AGCCCTCACG ATCAATATTA CTTCGAGCGC
CGGACCGATC TCGTCGCCGG GATCGTGAAG GCGCCTGCGA TTGATCTGGT CAACCCTGAC
CTGCTGGCCT CGCACGTCAA TGCTGAATGG CTTGCCGCCG CGCAGGAGGG GCTTGGCAAA
TCAATCCCTG AAAACCTCGA TATGGACGAT GAGGCTTTGC CGGTTTGTTC GCGGCTGATC
GCGGCCTTCG AGACGGCAAC CAGCGATATA GAAGCGCGCG AGCGGGCTGT CAGGATCGTT
GGCTCGGCGC TCCCTGCGGA AGGCTCTCCG GTGATCGGCA GTCCCGAGGT TTTTGTTACA
GCGCGCTGGG ACAACGCGGG TCATGCTATT GATCTTGCCT TCAAGCGCTG GCGCACACTC
TATCGTTCAG CGAATGAGGA ACGCCGGGAA GCGTCGGCGA TTGCCGATCG CCCGGGTCTT
TCGGCTCAGG AACGTAAGGA TGCCCGGTCG CGCTATGTGG CGGCTGACAA GCAGGTCGAG
CTGCTGGCCA AAGGCGTCTC ATCGGCGAGT TCGGACTTCT ATGCCTATCG CTACCTTGCG
ACCGAAGGGT TTCTACCCGG CTATAATTTT CCGCGCCTCC CGCTTTATGC TTTCGTCGAC
AGTGACCGCG GATCGGCGGT GCTGCAACGA CCGCGCTTCC TTGCGATTGC CGAGTTCGGG
CCCAACAGTC TTGTGTATCA CGAAGGCAAG GCGTTTAGCT GCAATCGCGC CAAGTTGCCT
GCTGGCACCC GGGGCAACGA TAACAAGCTC GTCACGACGA CGATGCGCTG CTGCCACGCC
TGCGGTGCTG CGCATAGTAG TGAGACCATC GAACGGTGCG TCGTGTGCCA TGAGCCGCTG
ACCGAGGAGG GTCGGCTTTC CAAGCTTTAC AGGATCGAGA ACGTCGATGC CTCGCCAAGG
TCACGCATCA CCGCCAACGA CGAGGACCGC CAGCGGCGCG GTTTCGACCT CAGGACGATC
TTCGAGTGGG ATCCGGCGCG GCAGGAAAGC CTGTTGTTAA AGACATCGGA TGGGCCATTG
GTGGCGCTGC GTTATGGCCC GCAGACCAAG CTCTCTCGTG TGAATCTTGG TTTGAGACGA
AGGGCCCACA AGGAACACAC AGGTTTCGAT ATCGATACGA TCTCCGGCCG CTGGCTCAAG
AATGAGGCGC AAGGCGAGGA TGAGGGCCAC GTCGATAACA GCGCGAAGCG TCAATCTATC
GTGCCTGTCG TCGAAGACAC CAAGAACGCG CTTCTGCTCA AGTTCGATCC TCTGATCGAG
CTCGACAATA GTCAGATGGC AACCCTGCAG CATGCGCTCG TTCGTGCCAT CGAAACCGAG
CATGTGCTTG AAGCTGGTGA GCTTCTGGGC GAGCCATTGC CGACCAAGGA TGACCGCCGA
GCGATCCTCT TCTACGAAGC CTCGGAGGGC GGCGCGGGCG TACTAAAGCG GTTGATGGAC
GGGCCCGAAC GTTGGCGCCG CTTGGCCGAG GTCGCGCTCG ATCTGATGCA TTACCGCCTT
GAGGACGGCA GGCTCGTCGA GAAAGAGGAC GCCTGTGTCG CCGGCTGCTA CCGCTGCGTT
CTGTCCTACT ACAATCAGCC CGATCATGAG ATGATCGACC GGCGCGACGA CGCAGTGCTT
GATGCGCTTG TCGGGCTCGC CGCTTGCGAG AGAGACTGGC CTGCAGCCGG TCCTGCGGGA
GCTGATCCAC AATCTGACCC CTGGCTCGCC GCCTTTGCCA GCTGGGGGTT CCCGGCACCG
TCGAGCGAGA CCATCGCGGG GCTCGAGTAT GCCATGGTCT GGCCCGGCCA CATGGTGATG
GCGGTTGCTC AGTCCCCATC GGAGGCCTTG CGTGATCGCT GCGCGGAGCT CGGCCGAGAA
TTGATTGCCC TGCCCGATGA ACCCGGCACG AACCCGCCGT CAGATCTGGC GAATGCATTG
GGAGTTTCTG CATGA
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| Protein sequence | MNVFELDADL IARYEKFARS FTSIRAEDLR GQIDAVYEGG KFWPEPLIGL NPEFKRGRSV
ADLARQGVVD PDLETVFALG TPRTPISLHL HQEQALMKAL QSRNYIVTTG TGSGKSLCFF
VPIINRILAA RRAGEPRRTR AIVIYPMNAL ANSQREELEK FIEHCGLDSS LKPTFARYTG
QEQDSERKAV AANAPDIILT NFMMLELLMT RQDEVDRQVI ENMKGLEFLV LDELHTYRGR
QGADVAMLVR RVRERMGSEK MLCVGTSATM ASGEEDAGRD AVSKVGSILF GSPVLSEDVI
TESLVRRTEG TPSDAALRAA VLEPSKPATF EEFALDPLAC WIEMNIGLDG GEVLKRATPR
TLTEAADSLA QATQLEPAEC RSALADRLIA MNECRNDRDQ AFMAFKLHRF LSGAGTAHTT
LAPSGSRRVS LVGEKFDREE TEARLYPVYF CRDCGQEVHS VSIDNWGSVI ARPIDVAPRP
DGTDGDIEHG FLVPDSSGDL NFAGDVEDYP DSWQETSATG QLRLKNSHRG KHDGRRMYLG
RDGRHDPEGL LCWFFPGQFR FCPHCKSQPA PQARDINKLA GLSAEGRSSA TTLITTAALD
WMERAGQPVE IHRRKLLGFT DNRQDAALQS GHFNDFIFVT LLRGAMLQAV RSAGEDGLSH
EEFGNALRKA LGFDPDLRER RTEWMLDPEP VSFSAIDEAK KSINRVLAHR LWNDLRRGWR
FTNPNLDQLD LIKIVYPGIR MLAGDQATCS GAHRERMSET EERGFSILSQ VPADKREKMF
RQLFDHMRQG LAIAVDALDP NELEAVSIKS RQFLKDPWAI SQEEQNHDLS AQTALVVGTQ
GSKNDRIVRV SARGGLARAI VAEVGDLPLA DREPLIEAML LAAARHQMAR EFAAGPLLGW
RLAPGALRIV PGDGRPKKGQ DNRFFAELYS DVAVRLAAPG GLPLAFEARE HTAQVDSLLR
EMRECRFRFG NSDKQRMAEI ANDAKVIAEK RDFLPLLYCS PTMELGVDIS QLNVVYLRNA
PPTPANYAQR AGRAGRSGQA ALVVTYCAAQ SPHDQYYFER RTDLVAGIVK APAIDLVNPD
LLASHVNAEW LAAAQEGLGK SIPENLDMDD EALPVCSRLI AAFETATSDI EARERAVRIV
GSALPAEGSP VIGSPEVFVT ARWDNAGHAI DLAFKRWRTL YRSANEERRE ASAIADRPGL
SAQERKDARS RYVAADKQVE LLAKGVSSAS SDFYAYRYLA TEGFLPGYNF PRLPLYAFVD
SDRGSAVLQR PRFLAIAEFG PNSLVYHEGK AFSCNRAKLP AGTRGNDNKL VTTTMRCCHA
CGAAHSSETI ERCVVCHEPL TEEGRLSKLY RIENVDASPR SRITANDEDR QRRGFDLRTI
FEWDPARQES LLLKTSDGPL VALRYGPQTK LSRVNLGLRR RAHKEHTGFD IDTISGRWLK
NEAQGEDEGH VDNSAKRQSI VPVVEDTKNA LLLKFDPLIE LDNSQMATLQ HALVRAIETE
HVLEAGELLG EPLPTKDDRR AILFYEASEG GAGVLKRLMD GPERWRRLAE VALDLMHYRL
EDGRLVEKED ACVAGCYRCV LSYYNQPDHE MIDRRDDAVL DALVGLAACE RDWPAAGPAG
ADPQSDPWLA AFASWGFPAP SSETIAGLEY AMVWPGHMVM AVAQSPSEAL RDRCAELGRE
LIALPDEPGT NPPSDLANAL GVSA
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