Gene Saro_0342 details

Gene Information

• Locus tag: Saro_0342
• Symbol: cobN
• ID: 3915584
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: -
• Start bp: 363542
• End bp: 366826
• Gene Length: 3285 bp
• Protein Length: 1094 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640443071
• Product: cobaltochelatase subunit CobN
• Protein accession: YP_495624
• Protein GI: 87198367
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases
• TIGRFAM ID: [TIGR02257] cobaltochelatase, CobN subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGTCA TTTTCCGCGA AACGCACGGG ATGGAGGAAA CCGCCGTCCC GCAGGATCTG 
GGGCAAGAGC CCGCGGATCT TGTGGTCCTG TCCTTTTCGG ACAGCGATCT GGGGGCGTTC 
GCGGCGGCAT GGCATCAGGC CCGTGCAGAC GATGCGACAT TTCCTTCGCT GCGGCTCGCC 
AATCTGGCGG CGCTGATGCA TCCGCTGTCG GTCGACACGT ATGCCGAGCG GACGCTGTCG 
GGCGCAAAGG CGATCCTGAT CCGGCTGATC GGCGGCACGC CCTATTGGAG CTACGGGCTG 
CAACAGGTCG AGGCGCTGGC CCGGTCGCGC GGGATCGTGC TGGCCGTGCT GCCCGGCGAC 
GGCTTTGAGG ATGCGCGGCT GGATGCGGCC TCGACCGTGC CGGTGACCGC GTTGCGCGAA 
CTTGCGCAGT GGTGCGATGC TGGCGGTGCA AGGGCGGCGC AGGCGGCGCT TGCCGCGCTG 
TCGCAGCTGG CGGGGCTGAT TGATGCCCCC GCCCGGACAT TCGATCCGCT GCTGATGGCG 
GGAGGCTGGC ATCCCGGCCG GGGCGTGATC GATCTTGAAG CCTTTGCGCG CGATCCCGCA 
AGGCCGCTGG TCCTGATCGT GTTCTATCGT TCTTACCTGA CCGCCCACGA TCTGGACCCG 
TTTGCCGCCC TGCATACCGC GTTCGAGCAG CGCGGTTTCG ATGCATTGTC GATCTTCGTC 
CCCTCGCTGA AAGCCCCGCA GGTGCGCGAA CAGGTGGACC GCTGGGTGCG CGGGCTTGGC 
CCGGCAGCGA TCATCAACGC TACCGCTTTT TCCGCGCGGG GCGATGACGG CGCCACCCCG 
CTTGATGGCG CGGGCGTTCC CGTGTTTCAG CTGGCGCTGG CCACGTCCGG GCGCGCGGGA 
TGGGCAGCGG CTTCGCGCGG GCTTTCCCCG GCAGACCTTG CCATGCACGT GGTCTTGCCC 
GAAATTGACG GGCGGGTGTT TGCAGGCGTC GCCAGCTTCA AGGAGGCGGG GACGCGCGAT 
CCCGCGCTTG GCTTTGCCCG CACCATCCAT CGCGCCGATG CAGGCCGGGT TGGGGCGATC 
ACCGCGCGGG TGGCGGGCTG GATCGCACTT GCCCAAACGC CGGTTGCAGA ACGGCGGGTT 
GCGCTGGTCC TGTCTACTTA TCCCGGCAAG ACATACCAGA TGGCCCACGC CGTGGGGCTG 
GATGCGCTGG CTTCTGCCGA GGCGATCCTG GCCGATCTGG CCGAGGCGGG ATATGCCACT 
GACGCGCAGG CCGGACTGGC AGCGCTCCTT CAATGCACAC ATCAGCACTG GCCGATGGCA 
GAGTACCGCA AGGCTTTGGC AGCACTGCCC GATACCCTGC GCGCTGAACT TTTCGCCGCA 
TGGGGCGAGC CGGAAGCCGA TGCTGCCGCC GCCGATGGCG CGTTCCGTTT TGCCGCGCTG 
CCCATCGGCA ACGCGCTGGT AGCCTTGCAG CCCGAACGCG GCGAACGCGC CCATCGCGAC 
GGCGACTATC ACGACCTGTC CCGCTGCCCG CGCCATGGCT ATGTGGCGTT CTACCTGTGG 
CTGCGCCAGC GAAGCGTGGA CGCGCTGGTG CATATCGGCG CACATGGCAC ACTGGAATGG 
CTGCCGGGCA AATCAGTCGC GCTGTCCGAT GCTTGCTGGC CCGAGGCGCT GACCGGCGCG 
ATGCCGGTGA TCTATCCGTT CATCGTCAAC GATCCCGGCG AAGCGGCGCA GGCCAAGCGC 
CGGATCAGCG CGGTTACGAT CGGGCACGTT CCCCCGCCAC TGGTGCAAAC GCAAAGCGGT 
GCGGGGCTGG CCCGGATCGA GGCGCTGCTG GATGAATTCT CCAACGCTGG CGGGCTGGAC 
CCGGCCCGCC GCGACCGTCT GCAAGTGAAC ATCCGCGACG AAGCGCGCGT GCTGGGACTT 
GAGGCGGAAC TGGGCCTTGA TGACGCGGCC ACGCTGGTCG AGGCGATCAC CCGGATCGAC 
CGCTTCGTTT GCGATGTAAA GGACAGCCAG TTCGGTGACG GGCTGCATGT GTTCGGGCGG 
GGAGATCAGG GCGCAGCCGA GCGGGCCGGA TTGCTGGCGG CACTCGACGG ACGCCGCGTT 
CCGCCCGGTC CCTCCGGCTC CCCCTTTCGC GGGCGCAGCG ATGTGCTGCC AACCGGGCGA 
AACCTTTATG CGATAGACCC GCGCGCCGTG CCTTCACGCG CGGCCCATGC CCAAGGGGTG 
ACACTGGCAG AGGAGCTGAT CCGGCGGCAT CTGCAGGATC ACGGCGATTA TCCGCGCGGG 
CTGGTGGTCG ATCTGTGGGG ATCGGCCACG ATGCGCACGG CGGGCGAGGA ATTCGCCATG 
GCGCTGCACC TGCTGGGCGC AAAGCCGCTG TGGGACACCG CGTCCGAACG GGTAACAGGC 
ATCGAAATCC TGCCGCTGGC GCTGCTGGAC CGGCCGCGTA TCGATGTGAC GTTGCGGATT 
TCCGGCCTGT TCCGCGATGC CTTTCCTGCG CTGCCGATAC TGTTTGGCCA AGCGGTGCGC 
GCGCTGTGTT TGCGCGATGA ACCGGCGGAC TGGAACCCGT TTGCAGGGCA GGCTGCGGCA 
CCGCGCGTCT ATGGCCCGGC CCCCGGCAGC TATGGACTGG GTCTTGGCGA TGCAGCCGAG 
GTCTATACTG AAGCGGCCCG GCGCGCTGCT GGTGAGGCAT GGCTGGCGGC ATCGGACCAT 
GCGTTTGACG CAGCCTCCGA TGCGATCGGA ACCTTTGCCG ATCCTGCCGG CCTGCGCCAG 
CGTGTTGAAG GAGCGGACGC CTTTGTCCAT CTTCAGGACT TGCCCGAAAC CGATCTGCTG 
CTGGCCGCCG ATTATGCCGC GCACGAGGCG GGCTTTGCCG CTGCCAAGGC GCTGATCGGT 
GGTTCGGCGG CGCTCTACCA CCTCGACAAT CGCGATCCGG GGCGCACCGT TGCGCGCACC 
CTGACCGAAG AGATCGCCCG CGTGGTCCGC GCCCGCGCGG CGCACCCAGG CTGGGTGGCG 
GGCATGATGC GGCACGGCTT TCGCGGGGGG GCAGAACTGG CCGCGACGCT GGACCATATG 
GGTGCCTTTG CGCACCTTTC AGGCAGCGTA CCGCCGCATC TGTTCGACCT TTATCACGAC 
GCGACACTGG GCCAGACCGA TGTTCGCGCA TTTCTTGAAC GCGAGAATCC GGCTGCGCTG 
GCGGCGATGG AAGCCCGCTT TGCCGCGCTC CATGCCGCCG GGCTGTGGCA GACCCGGCGC 
AATTCCATCC TCGCCAGCCT GCCAAGGCTT GAGGACAGGG CATGA 

 

Protein sequence

MHVIFRETHG MEETAVPQDL GQEPADLVVL SFSDSDLGAF AAAWHQARAD DATFPSLRLA 
NLAALMHPLS VDTYAERTLS GAKAILIRLI GGTPYWSYGL QQVEALARSR GIVLAVLPGD 
GFEDARLDAA STVPVTALRE LAQWCDAGGA RAAQAALAAL SQLAGLIDAP ARTFDPLLMA 
GGWHPGRGVI DLEAFARDPA RPLVLIVFYR SYLTAHDLDP FAALHTAFEQ RGFDALSIFV 
PSLKAPQVRE QVDRWVRGLG PAAIINATAF SARGDDGATP LDGAGVPVFQ LALATSGRAG 
WAAASRGLSP ADLAMHVVLP EIDGRVFAGV ASFKEAGTRD PALGFARTIH RADAGRVGAI 
TARVAGWIAL AQTPVAERRV ALVLSTYPGK TYQMAHAVGL DALASAEAIL ADLAEAGYAT 
DAQAGLAALL QCTHQHWPMA EYRKALAALP DTLRAELFAA WGEPEADAAA ADGAFRFAAL 
PIGNALVALQ PERGERAHRD GDYHDLSRCP RHGYVAFYLW LRQRSVDALV HIGAHGTLEW 
LPGKSVALSD ACWPEALTGA MPVIYPFIVN DPGEAAQAKR RISAVTIGHV PPPLVQTQSG 
AGLARIEALL DEFSNAGGLD PARRDRLQVN IRDEARVLGL EAELGLDDAA TLVEAITRID 
RFVCDVKDSQ FGDGLHVFGR GDQGAAERAG LLAALDGRRV PPGPSGSPFR GRSDVLPTGR 
NLYAIDPRAV PSRAAHAQGV TLAEELIRRH LQDHGDYPRG LVVDLWGSAT MRTAGEEFAM 
ALHLLGAKPL WDTASERVTG IEILPLALLD RPRIDVTLRI SGLFRDAFPA LPILFGQAVR 
ALCLRDEPAD WNPFAGQAAA PRVYGPAPGS YGLGLGDAAE VYTEAARRAA GEAWLAASDH 
AFDAASDAIG TFADPAGLRQ RVEGADAFVH LQDLPETDLL LAADYAAHEA GFAAAKALIG 
GSAALYHLDN RDPGRTVART LTEEIARVVR ARAAHPGWVA GMMRHGFRGG AELAATLDHM 
GAFAHLSGSV PPHLFDLYHD ATLGQTDVRA FLERENPAAL AAMEARFAAL HAAGLWQTRR 
NSILASLPRL EDRA