Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0254 |
Symbol | |
ID | 3917605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 266331 |
End bp | 267662 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640442981 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_495536 |
Protein GI | 87198279 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCTC CAGAATTCTT CGAAGTCAGC CAATGGGTCG AACGGCCGGC ACAGACCTGC CCGCCGCTAT CTGGCGAGAT ACGGGCCGAC GTGGTCATTG TCGGCGGCGG CTTCACGGGC CTGAGCACGG CGCTTTCGCT GCGCGAGGCG GGCGTGGACG TGGCGCTGGT CGAGAAGGAC TTCTGCGGAA TGGGCGCCAG CGGACGCAAC GCCGGGCACC TGACCCCGAC CATCGGCAAG GACTTTCCCT CGCTGGTCAA GAGCGTCGGC AAGGAACGGG CGGTGGAATT CGCGCGCTTT GCCGACCGGG CAGTGCACTA TACCGAGGCG ATGATCCGCA AGCTGGGCGT GGACTGCGAG TACCGGCCGA CCGGCAATAT CGTCACCGGC CTTCACCCCC GCCACCGCAA ACCGCTCGAG GAGGGCGCCG AACTGGCCTC GCGGCTAGGC GTGGGACTCG CGTTTCTCGA CGAAGCCGAA GTGCGCCGCC GCAACCTGCC GGGCCATGTC CGCTTCGGCA TGATCGAGAA GGCGGGCGGA CACCTTCATC CCGGCAAGTA CGTGATGGCG TTGCGGCAGG CGGCAATCGA TGCGGGCGTG CGCATTTTCG AGGACAGCGC CGTAAGCCGG ATCGAGGATG CGGGCTCCCC GGTGGTCGTT CACACCGCAA CCGGCTCCGT CAGCGCGGAC AAGCTGGTGA TTGCGACCAA CGCCTATACG CCGGTCACGC TCGGCCGCAT GCGCAGCAAG GTCTTCCCGG TGCGGGTCAC CCTGTTCCGC ACCCAGGTGC TGACCGACGA GCAGTGGAAA CGCATTGGCT GGGAAGGCGG GGAAGCGCTT TATACTGCGC ACGAAGCCAT GGAGAACTAT CGCCCCCAGG CGGACGGGCG CATCTCGGGC GGATCGAAGT TCGTCCAGTA TGGCTTCGGA AGCAAGTTGA CGCGCGGTTA TCTGCCCGAA ATCTTCACGA GGTGGCGCGA AGTCTTCGCA CGGCGCTTTC CCGAAATTCC GGATGTGAAG ATCGAATCCT TCTGGGGCGG CTGGATCGGA CTGACACTCG ATTTCCTGCC GATCCACCAA TCCAACGCGC GCGGCACGGT CTTCCACGGC ATCGGCTACA ATGGCCACGG CATCGCGCAG GGGACCTATG CCGGGCCGAT GCTGGCCGAT CAGGTGCTCG GTCGTGCCAA TGCCGAGGTC GACCTGTTCC GCCGCTACCT GCTGCCGCTG CCGCCCGAAC CGCTGCGCTG GCTGGTGATC AAGGGCATAA CCGCCACGCT GGACCGGATC GACCGCAAGG TCGATGCGGA TCTCGATGCC GGCCTCGCTT GA
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Protein sequence | MPAPEFFEVS QWVERPAQTC PPLSGEIRAD VVIVGGGFTG LSTALSLREA GVDVALVEKD FCGMGASGRN AGHLTPTIGK DFPSLVKSVG KERAVEFARF ADRAVHYTEA MIRKLGVDCE YRPTGNIVTG LHPRHRKPLE EGAELASRLG VGLAFLDEAE VRRRNLPGHV RFGMIEKAGG HLHPGKYVMA LRQAAIDAGV RIFEDSAVSR IEDAGSPVVV HTATGSVSAD KLVIATNAYT PVTLGRMRSK VFPVRVTLFR TQVLTDEQWK RIGWEGGEAL YTAHEAMENY RPQADGRISG GSKFVQYGFG SKLTRGYLPE IFTRWREVFA RRFPEIPDVK IESFWGGWIG LTLDFLPIHQ SNARGTVFHG IGYNGHGIAQ GTYAGPMLAD QVLGRANAEV DLFRRYLLPL PPEPLRWLVI KGITATLDRI DRKVDADLDA GLA
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