| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0228 |
|---|
| Symbol | |
|---|
| ID | 3916216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 235497 |
|---|
| End bp | 236642 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640442953 |
|---|
| Product | histidine kinase internal region |
|---|
| Protein accession | YP_495510 |
|---|
| Protein GI | 87198253 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3275] Putative regulator of cell autolysis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0985365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGC TGCCGTTCAG ACCGACGCCG TTCTTCGGCA ACAAGAACCG CGCCTTCTGG
CGCCTGCAGT TCCTTGGCTG GGGCGGCGCA ATGCTGCTGC GCGCGATGTC CTCCATCGCC
AATGCCCAGC CCTGGTCCTT CCTGGTCATC GTGGTAATCG CGACGATCAC CGGCTTCTCG
ATCTCGCTGC TGCTGTCGGT GATCTACCGC GCGGTCATCA ACCGGCGCCC TATCGTGACC
TGGGGCGTGA CGGCACTGGT GCTCTCGGCG GCGGTCGGGC TCTACGCCTT CATCGATTCC
TGGGTCATCA GCCTCTACCG TCAGGGCGGC GATGCCAGCT TCGCGCAGCT CTTCCTCGGC
GTCTTCTACC TTGACCTGAC GCTGCTGATC TCGTGGACGG GGCTTTACTA CGCGATCAAC
TTCTTCCTCC AGGTGGAGGA GCAGAACGAC CAGCTCATGC GGCTGGAAGC CCAGGCGACG
AGCGCGCAGC TTGCCATGCT GCGCTACCAG CTCAACCCGC ATTTCCTGTT CAACACGCTG
AACTCGATCT CGACCCTCGT GCTGCTCAAG CAGACAGAGC CGGCCAATGC CATGCTTTCG
CGGCTGTCCT CGTTCCTGCG CTACACGCTG GTCAACGAGC CGACCGCGCG GGTGACCGTG
GCGCAGGAAA TCGAGACGCT GAAGCTCTAC CTCGACATCG AGCTGATGCG GTTCGAGGAG
CGGCTGCGGA CCGAATTCCG CATCGACGAC GCGGTGCGCA ATGCGCTGAT GCCTTCGCTG
CTGCTCCAGC CACTGGTCGA GAACGCGATC AAGTATGCGG TCAGCCCGAT GGAATATGGC
GCCGAAATCA CCATCGAGGC GCAACTCGTC GGCCCCATGC TGCGGGTTAC CGTGTCCGAC
ACCGGGCCGG GGTTGCCACC GGGAACGGAC CCTTCGACAG TCTTCGGCGT GAGCACCGAC
TCTACCGGCA TAGGCCTTGC CAACATCCGC GATCGTCTGG CCCAGGCTTA TGGCGAAAAC
CAGCGCTTCG ACATCTCCAA CCGGCCGGAA GGGGGCTTCC AGGTCGTGCT CGAACTACCG
TTCGAAGCGC GTCCCGCCCC TCCGGTCGCA ACGCCTGCCC GCATACCGGC AGGAGCAACT
GCATGA
|
|---|
| Protein sequence | MAALPFRPTP FFGNKNRAFW RLQFLGWGGA MLLRAMSSIA NAQPWSFLVI VVIATITGFS
ISLLLSVIYR AVINRRPIVT WGVTALVLSA AVGLYAFIDS WVISLYRQGG DASFAQLFLG
VFYLDLTLLI SWTGLYYAIN FFLQVEEQND QLMRLEAQAT SAQLAMLRYQ LNPHFLFNTL
NSISTLVLLK QTEPANAMLS RLSSFLRYTL VNEPTARVTV AQEIETLKLY LDIELMRFEE
RLRTEFRIDD AVRNALMPSL LLQPLVENAI KYAVSPMEYG AEITIEAQLV GPMLRVTVSD
TGPGLPPGTD PSTVFGVSTD STGIGLANIR DRLAQAYGEN QRFDISNRPE GGFQVVLELP
FEARPAPPVA TPARIPAGAT A
|
|---|
| |