Gene Saro_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0224 
Symbol 
ID3916212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp232442 
End bp233143 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID640442949 
Productribonuclease T2 
Protein accessionYP_495506 
Protein GI87198249 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3719] Ribonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCC AGGCACTGGC GCTTCTCCTC CTGTCGATTC CCGGCGCGGG CCTCGCGCAA 
GGGTGGCAGT GCAGCATACC GCCGCAGATC GCGGTACCGC GTCTCCCTGC GCCCGATGCC 
CCGCCCCGCC TGACGCCGAT CACCGGCTAC ACCCTTGCGG CAAGCTGGTC GCCCGAGTTC 
TGCCGCACGC GCAAGGACGA TCCGCGCCAC GCCACGCAGT GTTCGGGCAA GCACGGCCGC 
TTCGGCTTCG TGCTCCACGG GCTCTGGCCG GAGGGCAGGG ATGGCCAGTT CCCGCAATAC 
TGCCCCTCGC GCCGCCTGCC CGATGCACAG ACCCTGCGCC GCAACTTCTG CACCACGCCT 
TCGGCCGACC TGATGATGCA CGAATGGGCG CGGCACGGCA CCTGCATGAG CGCCGACCCC 
GCCGCCTACT TCGACAAGGG CCGCGCGCTG TTCCAGTCGC TCCGCTTCCC CGACATGGCG 
CGTCTCTCGC GCACGCCGGG GCTCGACGCG AGCAAGATGC GCGAGGCGAT GTCGGTCGCC 
AATCCCCAGC TGAGGCCGGA CATGATCCGC CTGCTCCTGG GCCGCGACGG CTGGCTGCGG 
GAGGTCCACG TGTGCCTTTC GCGCCGGATG AAGCCTGCGC GCTGCCCCGG CGGCACGAAG 
CCGGCCGACA CGGTGCCGGT GAAGATCTGG CGTTCGTTCT GA
 
Protein sequence
MIRQALALLL LSIPGAGLAQ GWQCSIPPQI AVPRLPAPDA PPRLTPITGY TLAASWSPEF 
CRTRKDDPRH ATQCSGKHGR FGFVLHGLWP EGRDGQFPQY CPSRRLPDAQ TLRRNFCTTP 
SADLMMHEWA RHGTCMSADP AAYFDKGRAL FQSLRFPDMA RLSRTPGLDA SKMREAMSVA 
NPQLRPDMIR LLLGRDGWLR EVHVCLSRRM KPARCPGGTK PADTVPVKIW RSF