Gene Saro_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0205 
Symbol 
ID3916193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp212005 
End bp212925 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content67% 
IMG OID640442930 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_495487 
Protein GI87198230 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAAGTT TCGAGAACGA GATCGCCTTC ATCACGGGCG GTGCTTCGGG TGCAGGCTTC 
GGGCAGGCAC AGGTCTTCGG CCGGGCTGGC GCGAAGATCG TCGTCGCCGA CGTCCGCGCC
GAAGCGGTGG AGCGGGCCGT TGCCGCGCTG AAGGCCGAAG GCATCGTCGC TCACGGCCTC
GTCCTCGATA TCACCGACCG CCAGGCCTAC GCCGGCGCCG CCGACGAGGT CGAGCAGGTC
TTCGGCGCGG CGCCCACGCT TCTGTTCAAC ACCGCTGGCG TGAACAGCTT CGGCCCGGTC
GAGGATACCT CCTACGACGA TTTCGACTGG ATCGTCGGCG TCAACCTGGG CGGCGTCATC
AACGGCATGG TCACGTTCGT GCCGCGCATG ATCGCCAGCG GCAGGCCCGG CCACATCGTC
ACCACTTCCT CGCTCGGCGG CCTCATGGGC AGCGCGCTTG CCGCACCCTA CTCGGCGGCG
AAGGCAGCCG TCATCAACCT GATGGAAAGC TATCGCCAGG GCCTCGACAA GCACGGCATC
GGCGTTTCCG TGCTGTGTCC GGCCAACATC AAGTCGAACA TCGCGGAAGC CAGCCGCCTG
CGGCCGGCGC AGTTCGGCAA GAGCGGTTAT GTCGAAAACG AGGAGTCGAT CGCCTCGCTG
CATTCGATCC ACCAGCACGG CATGGACCCG GTCGAACTGG CAGAGCACGT CAAGGCGGGC
ATCGTGGCCA ATCAACTCTA CATCATCCCC TATCCCGAAG CGAAGGACGG GCTGCGCCAG
CACTTCGATG CGATCGTGGA CGCGGTCCTG CCGCTGGAGG CCGATCCCGA GGGCGCCCGC
GCCCGTACCG AGGCCCTCAA CGCCTGGGCG GCCGACCGCG CGCGCGTCTT CATGGAGAAG
AACGCCGCCC AGAAGGCCTG A
 
Protein sequence
MQSFENEIAF ITGGASGAGF GQAQVFGRAG AKIVVADVRA EAVERAVAAL KAEGIVAHGL 
VLDITDRQAY AGAADEVEQV FGAAPTLLFN TAGVNSFGPV EDTSYDDFDW IVGVNLGGVI
NGMVTFVPRM IASGRPGHIV TTSSLGGLMG SALAAPYSAA KAAVINLMES YRQGLDKHGI
GVSVLCPANI KSNIAEASRL RPAQFGKSGY VENEESIASL HSIHQHGMDP VELAEHVKAG
IVANQLYIIP YPEAKDGLRQ HFDAIVDAVL PLEADPEGAR ARTEALNAWA ADRARVFMEK
NAAQKA