Gene Saro_0204 details

Gene Information

• Locus tag: Saro_0204
• Symbol: thrS
• ID: 3916192
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: -
• Start bp: 209688
• End bp: 211682
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640442929
• Product: threonyl-tRNA synthetase
• Protein accession: YP_495486
• Protein GI: 87198229
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGAGT TGCTGAAGAT CACCCTGCCC GACGGTTCCG TGCGCGAGGT CGCGCCGGGC 
AGCACCCCGG CAGACATTGC CGCCGCGATC GGCCCGGGCC TTGCGAAGGC TGCACTGGCG 
GCGAAAGTCG ATGGCGAACT GGTGGACCTG ACGCGGCCAT TCACGGCGGA CGCGCAACTG 
GCGCTGGTCA CGGCGAAGGA CGAGGCCGAA GCGCTCGACC TTGCACGGCA CGATTATGCG 
CACGTCCTCG CCGAAGCGGT GCAGGCGCTG TTTCCGGGCA CGCAGATCAC CTTCGGGCCG 
AGCACGGACG ACGGCTTCTA CTACGACTTC GCGCCGAAGG ACCGGCCCTT CACCGACGAG 
GATCTGCCCG CCATCGAGGC GGAAATGCGC AAGATCATCG CCGCGAACAA GCCACTGCGC 
CGCGAGGTCT GGAGCCGCGA GCAACTGATC AGCCGCTGGA AGCAGCAGGG CGAGAGCTTC 
AAGGCCGAAT GGGCGGCGGA ACTGCCTGAG AACGAGGAAT TGACCGTCTA CTGGTCGGGC 
GACGACTGGC TCGACATGTG CCGCGGCCCG CACCTGCCCT CGACCGGCAA GCTCGATCCC 
AATGCGTTCA AGCTGACTCG CGTTTCGGGG GCCTACTGGC GCGGCGACCA GAAGAACGCG 
ATGCTCAGCC GAGTCTACGG TACCGGCTGG CTCAACAAGA AGCAGCTCGA CGCGCACCTG 
ACGCGGCTGG AGGAAGCCGC CAAGCGCGAC CATCGCAAGC TGGGCAACGA GATGGACCTG 
TTCCATCTCC AGCAGGAAGC GCACGGTTCG GTGTTCTGGC ACCCGAAGGG CTATCTGATC 
TGGCGCGAGC TGGAAGCCTA CATGCGCCGC GCTATCGACG GCGCGGGCTA TCGCGAGGTC 
AAGACCCCGC AGGTCATGGA CGCGCGCCAG TGGGAGCAAT CGGGCCACTG GGGCAAGTAC 
CGCGAGAACA TGTTCGTCAT TCCCGACGAA GTGCCCAACG TCGACGATGA AGGGCCGATC 
GTTTCGAACG ATGCGGACTG GATGGCGCTG AAGCCGATGA ACTGCCCGGC GCACGTCCTG 
ATCTTCCGCC AGGGCATCAA GTCCTACCGC GAACTGCCGC TGCGCCTGTA CGAGAACGGC 
TGCTGCCACC GCAACGAGCC GCACGGCGCG CTGCACGGGT TGATGCGGGT GCGCCAGTTC 
ACGCAGGACG ACGCGCACAT CTTCTGCCGC GAAGACCAGA TCGTTTCGGA AGTGCAGGCC 
TTCTGCGAGC TGGCCGACCG CATCTACAAG CACTTCGGTT TCACCTACTC GATCAAGCTC 
GCGCTGCGCC CGGAAAAGCG CTTCGGCACC GAGGAGATGT GGGACAAGGC CGAGCGCGAA 
CTGCGCGACG CGGTGGTGCG CGCAGGCCTT GCCACCGAGG AATACGGCTG GGAGGAACTG 
CCGGGCGAAG GCGCGTTCTA CGCGCCCAAG CTGGAATGGC ACCTGACCGA CGCTATCGGC 
CGTACCTGGC AGGTCGGCAC GATCCAGTCG GACCGCGTCC TGCCCGAACG CCTCGACGCA 
AGCTACATCG GCGAGGATGG CGAGAAGCAC CGCCCGGTCA TGCTGCACCG CGCGATCTTC 
GGTTCCTACG AGCGCTTCAT CGGCATCCTG ATCGAGCACT TCGCCGGTCG CCTGCCGGTG 
TGGCTCGCGC CGGTCCAGGC AGTGGTCGCC ACGATCGTTT CGGACGCCGA CGACTATGCC 
AGGGACGCGC TGGCCAAGCT GAAGGCGGCG GGCATCCGCG CCGATACCGA CCTGCGCAAC 
GAGAAGATCA ACTACAAGGT GCGCGAACAC TCGCTGCAAA AGGTTCCGTA CCTGCTGGTG 
GTGGGCAAGC GCGAGGCCGA GGAAGGCACC GTGGCGATCC GCATCCTGGG CGAGCAGCAC 
CAGAAGGTGA TGCCGCTCGA CGAGGCGATT GCCCTGCTCA AGGGTGAGGC CACGGCGCCG 
GATCTCAGGG CCTGA 

 

Protein sequence

MSELLKITLP DGSVREVAPG STPADIAAAI GPGLAKAALA AKVDGELVDL TRPFTADAQL 
ALVTAKDEAE ALDLARHDYA HVLAEAVQAL FPGTQITFGP STDDGFYYDF APKDRPFTDE 
DLPAIEAEMR KIIAANKPLR REVWSREQLI SRWKQQGESF KAEWAAELPE NEELTVYWSG 
DDWLDMCRGP HLPSTGKLDP NAFKLTRVSG AYWRGDQKNA MLSRVYGTGW LNKKQLDAHL 
TRLEEAAKRD HRKLGNEMDL FHLQQEAHGS VFWHPKGYLI WRELEAYMRR AIDGAGYREV 
KTPQVMDARQ WEQSGHWGKY RENMFVIPDE VPNVDDEGPI VSNDADWMAL KPMNCPAHVL 
IFRQGIKSYR ELPLRLYENG CCHRNEPHGA LHGLMRVRQF TQDDAHIFCR EDQIVSEVQA 
FCELADRIYK HFGFTYSIKL ALRPEKRFGT EEMWDKAERE LRDAVVRAGL ATEEYGWEEL 
PGEGAFYAPK LEWHLTDAIG RTWQVGTIQS DRVLPERLDA SYIGEDGEKH RPVMLHRAIF 
GSYERFIGIL IEHFAGRLPV WLAPVQAVVA TIVSDADDYA RDALAKLKAA GIRADTDLRN 
EKINYKVREH SLQKVPYLLV VGKREAEEGT VAIRILGEQH QKVMPLDEAI ALLKGEATAP 
DLRA