Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0189 |
Symbol | |
ID | 3916177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 193439 |
End bp | 195367 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640442915 |
Product | histidine kinase internal region |
Protein accession | YP_495472 |
Protein GI | 87198215 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTGT CGCAAATCGA TCCGGGCGTC CCGCGCGTGC CGGCACGGCA GGTAATCCTG TCGGCCGTGG CGCTGTGGCT CTGCTACTTC GTGCTGATTA CCGTGCGCGG GCTGGTGGTC GAACTGGGCG ACTTTTCGGA CCTCCTGTGG CGGCGTGCGC TGGTGACCGT TGCAGGGATC GTCGTGACCG TAGCCTGCTG GCCGTTGCTG CGCCGCTTCG ATGCGCGCCC GCTGGCAACG CGCGTGGGGG CGGCCCTGGT CATCATGCTT CCGGCCGCGC TTGCGCTGGC GGCAGTCAAC CAATGGGCCT TCGCCCCGGT CGAAAAGCGG ATGATCGAGC GGATCAGCAC CGATCAGGGC GATGAAGCCC CGACCCGCAC CTCGCAGGTC ACCGTGAAGA ACGGCGATGG CAAGGGCGGC GCGGTCAAGA TCCGCCACGA CATGGCCGGC AACGTTCTGG TCGACGTGCT GGACGAGGGC TTCGTTCCGC CCGTACCTGC TCCACCCCCT GCCCCGCCGC CGGCACCCCG CACCCCGCAC CCCACCCATG CCCCGGGCTC GACGGCCCAC GCCTCGCCGA CGACGGAACC GTTGCTCAGC GAGGAGGACG TTGCGGAACT GCGCAACCTG GGCGACGAAC GCACCATAGA GGCCTTGAAG AACGCCGGGA TCGTGCAGAA TCCCGACGGC AGCACGGTGA TCTCCCAGCC GGGGCTCTAT GTGCGGCAAT ATGCCGATGG CCGCTCCGAA GTGCGCACTG GCGGCAAGGT CTATGTCGTG GGCGATGACG GCGAGGTTGA ATCGATCCTG AGCGGCGCCC GGGACCCGGT CCCGCCGGAA CCTCCTGCCC CCGCTGCCAG CGCGGTTCCT CCAGCACCCC CGGCACCACC GGCCCCGGCA ATTTCTGCCG CCATGCAGGA GAAGGTGCGC GAAGCCGCGC GGCGCGAGAC CGAGAAGGCG CTGGGCAAGG CCGACGCGCT GCGCAAGGCC GCGCTGGCCC GCGCGCGCGA AGCCCGTGCC CGACATGCCG ACGCGCATCC CGTGGCCCAG CCTTCCGTCT CGGCCCGGCC TGCCGTTTCG GCCGAGCCCG CCGCTTCCGC CACGCCCGAA CCATCGCCCT CGGAGATCGT CACCGAGGAT TATCGCGGCT CCGACCATGT GACGATCATC CGCCAGACGG TAGAGAACGA GGGGCTGTGG CGGCAACTCA CCGACGTTGC CCTTGGTCGC TACTTCCTGC TCATCGCCTG GGCCGCGCTC TATCTTGCGC TGGGCAATGG CGAGCAACTC CGCGCCGCCG AATATCGCGA GGGCGAATAC CGGCGTGCGG CCAAGGCATC GGAATTGCGC TCGCTGCGCT ACCAGGTGAA CCCGCACTTC CTGTTCAACA CGCTCAATTC GCTGTCGGCC CTGGTCATGG TCGGTCGCAG CGAACAGGCC GAGCGAATGA TCCAGTCGAT CTCGCGCTTC TACCGTCACA GCCTTGCCGG CGATCCCACT GCGGACGTCC CGCTGGAGGA CGAGATCGCG CTCCAGCGCC ACTACCTCGA CATCGAGGCG GTGCGCTTCC CTGACAGGCT GCGGTGCGAG TTCGATGTTC CGGACGATCT GATGACGGCC TGCGTGCCGG GCATGATCCT GCAGCCGTTG GTTGAGAACT CGATCAAGTA CGCGGTCTCG ACCACTATCC GCCCGGTGAC GATCCGCATA GCCGCGCGCG AGGCGGGCGG TTTCCTGATC CTGACGGTGG CAGACGACGG GCCGGGCGAA AGCTTCGTCA ACGGCGGCAC CGGCATCGGC CTTGCCAACG TGAAGAGCCG CCTCGCCGCG CGCTTTGGCG AGGACGCGGC CAAGGTGGAA AGCGGGCCGC TGCCGGCGGG CGGCTATGCG ACCGTGCTGA CGCTGCCGAT TGTCCGCAAC GAATGCTGA
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Protein sequence | MTLSQIDPGV PRVPARQVIL SAVALWLCYF VLITVRGLVV ELGDFSDLLW RRALVTVAGI VVTVACWPLL RRFDARPLAT RVGAALVIML PAALALAAVN QWAFAPVEKR MIERISTDQG DEAPTRTSQV TVKNGDGKGG AVKIRHDMAG NVLVDVLDEG FVPPVPAPPP APPPAPRTPH PTHAPGSTAH ASPTTEPLLS EEDVAELRNL GDERTIEALK NAGIVQNPDG STVISQPGLY VRQYADGRSE VRTGGKVYVV GDDGEVESIL SGARDPVPPE PPAPAASAVP PAPPAPPAPA ISAAMQEKVR EAARRETEKA LGKADALRKA ALARAREARA RHADAHPVAQ PSVSARPAVS AEPAASATPE PSPSEIVTED YRGSDHVTII RQTVENEGLW RQLTDVALGR YFLLIAWAAL YLALGNGEQL RAAEYREGEY RRAAKASELR SLRYQVNPHF LFNTLNSLSA LVMVGRSEQA ERMIQSISRF YRHSLAGDPT ADVPLEDEIA LQRHYLDIEA VRFPDRLRCE FDVPDDLMTA CVPGMILQPL VENSIKYAVS TTIRPVTIRI AAREAGGFLI LTVADDGPGE SFVNGGTGIG LANVKSRLAA RFGEDAAKVE SGPLPAGGYA TVLTLPIVRN EC
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