| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0178 |
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| Symbol | |
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| ID | 3916166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 181101 |
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| End bp | 183626 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640442904 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_495461 |
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| Protein GI | 87198204 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGCCA GCCGTCTTCT ATTGAACTCA TCGGCCCTTG GCCTTCTGCT GGCCGCCACG
CCGGCTCTCG CCCAGGAGGT TCCGCAGGAC AGCGCCGCGT CCGCAGACGG GGGCGAAACG
ATCATCGTCA CCGCCCGTCG CCAGAACGAA CGGCTTCAGG ACGTTCCGGC CTCTGTCTCC
GTGCTGACCG CGACGGCACT GCAGAACACG GGCGCCACCA AGGCAGAGGA TTTCACCCAG
CTCACCCCCG GCGTCACCAT CGTGACCGGC ACGGCCGAAG CTGGTGACAC GCAGATCAAC
ATCCGCGGCA TCAACGGCGC GCGCGATGCG GAAAGCTCGG TGGCCTTGGT GGTCGACGGG
ATTCTCAAGA CCAATACCGC ACAGCTCAAC CAGCCCCAGG GGACGCTGAC CCAGGTCGAA
GTGCTGAAGG GGCCGCAGGG CGCGCTCTAT GGCCGCAACG CGGCGGCCGG CGCCATCGTG
CTGCAGACGC TGAAGCCCAC GGACACGCTG TCGGGCGGAC TGCGCGCCTC CTACGCCAAC
GAGGCGACCT ACGAGGCGAC GGCGCATATC GCGGGGCCGC TGGGCGACAA CATCGGCTTC
GTGCTTTCGG GATACTATTT CACCACCGAC GGCTGGTGGC GCAACACCTT GCTCAACAAT
TCCAAGACCG TCGACGACAA GGAGAACTGG GCGATCGACG GGCGCGTGAT GGTCGGCCAG
GGCACATCGA CCCAGCTCGA CCTCAAGGCG CGCTATGCAG AGTTCCACGG CGCTTCCCTG
CCGTTCAACG CATCGTTCCA TCTGCCGCTG TTCGGCACGG TGAACCCCGC GTTCTACGAG
GACGTGAACA AGCACGAGTT CAACTTCTAC AACAACATCC GCGCGACCAA CGACCAGAAG
AGCTTCGACG TCTCGGCCAA GATCGATCAC GAATTCGGCA ACGGCATGAA GCTGGTTGCC
TGGGCGCTCT ATTCCGACGT CAAGCAGGAC CTTGTCGCCG ATGGCACCTC GGCGGATTTC
GCGCGCTACA TCTCGAATGC AGATTCGGCG GTGGACAGTT CGGTCGCGAG CTGCTTCGCC
AGCACGGCGG CGCTGACCGG CTTCCCGGTC AACCAACCCG GCTTCATCGG ACAGATCCCG
GTTCCGTTCC TCTTCGCGCC GTCGACGGGC TCGACCTTCG GCCCATACAG CCCGACGACT
TGCGACGGCA TCCAGTACCA GCTTCGCAAC CAGAAGGACT TCAGCACCGA AGTTCGCCTG
CTGTCGGACA CGGACGGGCC ACTCACCTGG CAGCTTGGCG CCTATTACCT GCACATCGAC
CGCAAGACCG GCGTCAGCCT CGGTGCCGAT ACGGGACAGG GCGTCATCAA GCAGCTCTAC
AACGCTCCGG ACACCGCGAA CCCGACATCG CTGCTGCTGG CCGACAAGTT CCGCACCAAC
GTCTACGCCG CCTTCGGTGC AGCCGAGTGG AAGCCGTCCG AAGTCTTCAC CGGCGGCATT
GCGCTGCGCT ATGACATCGA GGACCGCGTG GCCAACTCGC TGGTTCCGGA CGTGACGGAT
CCCTTCACCG GGGGCCCGAT CAACCCGGGT CTCGCGTTCG GGGCGTTCAA GCCGCAGAAC
GCGACGTTCA AGCAGCTCCA GCCCAAGGTC ACGCTGAGCT TCCACCCAAG CCCCGCGCTC
AACATTTACG CCAACTGGGG CATCGGCTTC AAATCGGGCG GCTTCAACAA CCAGGGCTCT
GCCGCGGTGG TGGACCAGAA CTTCAATCAG TTCATCAACG CCGGGGTGAC GATCGACGAC
CAGTATCGCA AGGAGAAGTC GAGCGCGTTC GAGGCCGGCA TCAAGGGCGA ACTGCTTGAC
GGACGGGTGA CCTACGACCT TGCAGCCTAT TACACCCGCG TCACGGACAT GCAGTTCTTC
GAGTTCTTCG TCGGCAGCTT CGGCCTCCTG CGTGTAGTCT CGAACATCGA CCGCGTGGAC
ATCAAGGGCG CCGAGCTGAA CCTGACCGGC AAGGTCGTGG ACGGGTGGAA GGTCTTCGGA
TCGTTCAACG TCACCGACAG CGAGATCAAG AAGAACCGCT CGCGTCCCTA CACGGTGGGC
AACAAGTCCC CCTATACCGC TGACTGGACG ATCAACCTTG GCACGGAAAT CAACGCGCCG
ATCAACGACA GCGTGAAGCT GCTGCTGCGC GCCGACTATC GCATCACCGG GCCAACGTGG
TTCCATTCGG TCCAGGACCA GGAACGGCCG ACGCTGTTCT CGGGTCTGCT GCCGATCTCC
GAACTCAACT TCCTGCCGCC CTCGTTCGGC AATGCGCGGT ATGACGTGGC CCGGCGCGAT
GCCTTCGGCG TGCTGAACCT GCGTGCCGGG ATCAACACCG ACCGCTACCG GATCGCGGTG
TTTGCCGATA ACCTGCTCGA TCGCAAGTAC ATCGCCGAGG CGATTCCCGC GATCGAGTTT
GGCGGGTCGT TCATCTCGCC GGGCGCGCGC CGCCTGATCG GGGTGGAAGT CGGCGCTTCG
TTCTGA
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| Protein sequence | MRASRLLLNS SALGLLLAAT PALAQEVPQD SAASADGGET IIVTARRQNE RLQDVPASVS
VLTATALQNT GATKAEDFTQ LTPGVTIVTG TAEAGDTQIN IRGINGARDA ESSVALVVDG
ILKTNTAQLN QPQGTLTQVE VLKGPQGALY GRNAAAGAIV LQTLKPTDTL SGGLRASYAN
EATYEATAHI AGPLGDNIGF VLSGYYFTTD GWWRNTLLNN SKTVDDKENW AIDGRVMVGQ
GTSTQLDLKA RYAEFHGASL PFNASFHLPL FGTVNPAFYE DVNKHEFNFY NNIRATNDQK
SFDVSAKIDH EFGNGMKLVA WALYSDVKQD LVADGTSADF ARYISNADSA VDSSVASCFA
STAALTGFPV NQPGFIGQIP VPFLFAPSTG STFGPYSPTT CDGIQYQLRN QKDFSTEVRL
LSDTDGPLTW QLGAYYLHID RKTGVSLGAD TGQGVIKQLY NAPDTANPTS LLLADKFRTN
VYAAFGAAEW KPSEVFTGGI ALRYDIEDRV ANSLVPDVTD PFTGGPINPG LAFGAFKPQN
ATFKQLQPKV TLSFHPSPAL NIYANWGIGF KSGGFNNQGS AAVVDQNFNQ FINAGVTIDD
QYRKEKSSAF EAGIKGELLD GRVTYDLAAY YTRVTDMQFF EFFVGSFGLL RVVSNIDRVD
IKGAELNLTG KVVDGWKVFG SFNVTDSEIK KNRSRPYTVG NKSPYTADWT INLGTEINAP
INDSVKLLLR ADYRITGPTW FHSVQDQERP TLFSGLLPIS ELNFLPPSFG NARYDVARRD
AFGVLNLRAG INTDRYRIAV FADNLLDRKY IAEAIPAIEF GGSFISPGAR RLIGVEVGAS
F
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