| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0163 |
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| Symbol | |
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| ID | 3918298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 160892 |
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| End bp | 163015 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640442888 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_495446 |
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| Protein GI | 87198189 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGCCA ACGAAATTAG TTTCTTGCCG TGGCCAGACG TGCCAGTAAT GCCGGCAACA
CCTGCGCGGG AGCTGCGCAG ACAAGGACAA CAGACGAGAT CGCACGCCCG CATGGCCCAG
ATTGAAATGA CCGCAGACCA GACCCCCACG CCGCACCGCC CGGAGGGCCC CGACCCGGCG
GGCGAATGGT TCGGCCACCC CGCGCAACTG AAACGTCTGT TCACCACCGA GATGTGGGAG
CGTTTCGGCT ACTACGGGAT GCGGGCGATC CTGACGCTCT ATCTCGCCAA GCATTTCCTG
TTCAACGACA CGACCAGCAC GGGGATCTAC GGTGGCTTCA CCGCGCTCGT CTATCTCACG
CCGCTGATCG GCGGCCTCAT CGCCGACCGC TATCTCGGCT CGAAGCGATC AGTGAAGTTC
GGCGCGATCC TGATGGCGGT CGGCTACTTC ATGCTCTGCT TCGGCGGCGA TGCGGCCAAA
CCCTATGCCA CGATCGAGGG TCAGCGCTAC GAGGTGACAG TCACCAAGAC CGATGCAGGC
GAAGTCCGAT CGGTCGAAAT GAACGGCCAG CGGCTCGAGA TCGCCGGCAA CGAGGACAAG
TCGGTTTCGC TCAAGGCAAC CGACGGCACC GAGGCGCGGC GCATCGCGCC CGGCGGCTTC
GAATCCGACG GCGAGCGCTC GCCGCTCCAC ATCACTATCC TGCTCGTCGG CCTTTCGCTG
GTGACCGTCG GCAACGGCTT CTTCAAGCCC AACATCTCCA CCATCGTCGG AACTCTCTAT
GCAGATGGCG ACAGGCGCCG CGATGCCGGC TTCACCATTT TCTACATGGG CATCAATCTC
GGTTCGCTGA TCTCGCAGTT CTTCTGCCCG ATCCTCGCCG AATCCGTTGG CTGGTGGGCC
GGATTCGGCC TCGCCGCCAT TGGCATGACC TTCTCCTGGC TGCTGTTCCA GTTCGATGGC
GGCAGGCTCG ATGGATATGG CGAGCGCCCC GCCGGCGCCG ATCCACGCAA GGATTGGCTG
ATCTACGGCG CCGCGCTCGT CTGCGTACCC TTGTTCTGGT TCCTGTTCAC CAACCTCATG
GCTTATGTGC CCCCTGCGGC GGGCGAGGGC CTCGTCGGGT ATTTCCTGGG CCTGCCGATC
ATGGGCAAGC TGATGTTCGG CACGTTCCTG CTGGCAGTTC CGGGCATCCT CGTCTGGGCA
CTCGCGGCGG GAAGCCGCGT CGAATTCCAG ATGATGGTCG CGGCAATGGT GCTGATCGTC
TTCAACACCG TGTTCTGGAC CCTGTTCGAA CAGGCAGGGT CCTCGCTGAC CCTGTTCGCG
GAGCGCAATA CCCAACTCGA GATCGGCTGG ACTCGACCGC TCTTCGCGAT GTTCCGCGCC
AGCCCCGCCA GCTACTACCT GTTCTTCGCG ATCCTGCTCG GCGGCCTTGG CTGGCTGCTC
GCCTGGTTCT TCGGTCAAGG CGAGGTTCCG GAAACGCGCA GGAAGATCAG CCTCGGCTTC
GGCATCGCCA TGCTCGCCGG GTTCGGCGGG ATGCTCTATG CGCGCACCCA GGGCTTCGGC
AGCGAACCGG TCTATGTCAT GCCCGCAGGA CAGACCCAGA TCTTCAACGC GCTTTTCATC
GTGACGCTGG CGCCAGTATT CAGCGTAATG TGGAACGCCC TGGCGCGTCG CGGCGTGGAG
CCTTCGATTC CGGTCAAGTT TGCGCTCGCG CTGATGGGTG TGGGCGGAGG CTTCCTCCTG
CTGGTGTGGG GCGCTCAGTT CGCCGACGCG CAGTTCCGCG TAGGCCTGGC ATGGCTCGCC
GGCCTTTACC TGATCCATTC GATGGCAGAA CTGTGCATTT CGCCCGTCGG CCTTTCGATG
ATCACCAAGC TTTCGATGGC GCGCATCGTC GGCATGATGA TGGGCGTCTG GTTCCTGTCG
ATCGCCGTCG CCCAATACGT GGCAGGCATG GTCGCGCAGG TCGCCAGCGT CGAAACGGTT
GGGGGCCAGG TAACCAACCT CAAGGTCAGC CTCGACACCT ATGTCGGCGT CTTCACTACC
ATCGGTTGGG TTTCAGTGGG CATCGGCGTG GTGCTTCTCG TCGTTGCAGT GCCGCTGCGC
AAGTTGATGC ACGGAGTCAC TTGA
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| Protein sequence | MVANEISFLP WPDVPVMPAT PARELRRQGQ QTRSHARMAQ IEMTADQTPT PHRPEGPDPA
GEWFGHPAQL KRLFTTEMWE RFGYYGMRAI LTLYLAKHFL FNDTTSTGIY GGFTALVYLT
PLIGGLIADR YLGSKRSVKF GAILMAVGYF MLCFGGDAAK PYATIEGQRY EVTVTKTDAG
EVRSVEMNGQ RLEIAGNEDK SVSLKATDGT EARRIAPGGF ESDGERSPLH ITILLVGLSL
VTVGNGFFKP NISTIVGTLY ADGDRRRDAG FTIFYMGINL GSLISQFFCP ILAESVGWWA
GFGLAAIGMT FSWLLFQFDG GRLDGYGERP AGADPRKDWL IYGAALVCVP LFWFLFTNLM
AYVPPAAGEG LVGYFLGLPI MGKLMFGTFL LAVPGILVWA LAAGSRVEFQ MMVAAMVLIV
FNTVFWTLFE QAGSSLTLFA ERNTQLEIGW TRPLFAMFRA SPASYYLFFA ILLGGLGWLL
AWFFGQGEVP ETRRKISLGF GIAMLAGFGG MLYARTQGFG SEPVYVMPAG QTQIFNALFI
VTLAPVFSVM WNALARRGVE PSIPVKFALA LMGVGGGFLL LVWGAQFADA QFRVGLAWLA
GLYLIHSMAE LCISPVGLSM ITKLSMARIV GMMMGVWFLS IAVAQYVAGM VAQVASVETV
GGQVTNLKVS LDTYVGVFTT IGWVSVGIGV VLLVVAVPLR KLMHGVT
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