Gene Saro_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0139 
Symbol 
ID3916025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp142162 
End bp142860 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID640442864 
Productcarboxymethylenebutenolidase 
Protein accessionYP_495422 
Protein GI87198165 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAGA AAATCACGTT CGCAGCTCTG GATGGCGAAG GCGAAATCCC GGGCTACCTC 
GCAACGCCGG ACGGGCCGAT CCGCGCGGCA ATCATTGTCA TTCCGGAGAT CTTCGGCGTG
AATGCCGGGA TCCGGCACAA GTGCGAAGGG TGGGCGGCAC AGGGCTACAT GGCGTTGGCG
CCAGACATCT TCTGGCGATT CGCGCCGGGC GTCGAGCTTG ATCCCGATGT GCCGGAACAG
ATGCAGGAGG CATTCGGGTA TTTCCAGCAG TACGATGCAG ACAAGGGCGT GAAGGACATC
GAGGCCGCAA TCCGCTTCCT GCGCGGATAC GAAGGCATCG ACAAGGTCGG GCTGGTCGGC
TTCTGTCTGG GCGGGCGGAT GGCCTACATG GCAGCCACAC GAACCGATAT CGATGCGTCG
GTGGGATACT ATGGCGTGAT GATCGACCAG ATGCTGAACG AATCGCACGC GATCGCGCGG
CCGCTGATGT TGCACATCCC TACCGCCGAT CACTTCGTCG GACCGGATGC GCAGAAGGCT
ATTCATGATG CCCTTGATCC GCATCCACGG GTGACGCTCC ACGACTATGA GGGGCTGGAC
CACGGTTTCG CGGCGGAAAT GGGCAATCGC CGCGACGATG ACGGTGCCGA GCTTGCCGAC
CGGCGGACGC GGGATTTCTT CGCGCAGCAT CTTGGATAA
 
Protein sequence
MGEKITFAAL DGEGEIPGYL ATPDGPIRAA IIVIPEIFGV NAGIRHKCEG WAAQGYMALA 
PDIFWRFAPG VELDPDVPEQ MQEAFGYFQQ YDADKGVKDI EAAIRFLRGY EGIDKVGLVG
FCLGGRMAYM AATRTDIDAS VGYYGVMIDQ MLNESHAIAR PLMLHIPTAD HFVGPDAQKA
IHDALDPHPR VTLHDYEGLD HGFAAEMGNR RDDDGAELAD RRTRDFFAQH LG