| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0137 |
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| Symbol | trmE |
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| ID | 3916023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 140445 |
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| End bp | 141758 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640442862 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_495420 |
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| Protein GI | 87198163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGACA CGATCTTTGC CCTGTCTTCC GGCCAGCCAC CCGCCGGCAT CGGCGTTATC
CGCATCAGCG GCCCGGGCGC CGGCGCCGCG CTTAGTTCCC TTGCCGGCAG GCTGCCTTCT
CCCCGCCGCG CCACGCTTGC GACGCTCGCC GATCCGCGCG ACGGCACCCA CCTCGACCGT
ACCATGGTCC TCTGGCTGCC CGGTCCCGCC ACCGCCACCG GCGAGGACTG CGCCGAATTG
CACCTCCACG GCGGTCGCGC CGTGATCGCA GCCGTCGAAG CCGCGCTCTC CAGCTTGCCG
GGCCTGCGTC GTGCCCGGCC GGGGGAGTTC ACCCGCCGCG CCTTCGCCAA TGGCCGCATC
GACCTTGCCG AGGCCGAAGG CCTTGCCGAT CTGCTTTCGG CCGAGACCGA ACTACAGCGC
CGCACCGCGC TCGCCATGGC TGAAGGCGCG CTTTCACGTG AAGTCGATGA GTGGCGGACA
ACGCTGCTCC AGATCTCCGC GCGGCTCGAA GCCGCGCTCG ATTTCTCGGA CGAGGACGAT
GTCGGGGCAG GGGATGGGAC GCAAAGAGCC AGCCTCTTGC CGCCGCACTT CGCCGCAGAC
TGCATCAGTC TCGCCTGTTC CCTCAACACC TGGCTCGACC GTCCCCGCGC GGAGCCGCTT
AAGGAAGGCT TCCGCGTCGT GCTTGCAGGC CCTCCCAACG CCGGCAAGTC CACCCTGTTC
AATGCCCTTG TCGAACACGA GGCCGCGATC ACCGCCGCCG AACCGGGCAC GACACGCGAC
CTCCTGACGC ACGCTGCTGC GCTCGACGGA GTGCCTTTCA CTTTCGTCGA CACGGCAGGA
CTGCGCGACG AAGGCGCTGG CGAGATCGAG CGCATCGGCA TCGCCCGAGC CCGTGCTGCC
GCCGAAAAGG CAGACCTGAT CCTGTGGCTC GGCCCGGAAG GACTGGGACC GGCCGGCCGC
ACATTGTGGG AGATCGCCGC CCGCGCAGAC GATCCCGGGG CAGGGCGAAA ATCCCAGTGT
GCCTTCCATC TTTCTGCTGT GACCGGGGAA GGTATGGCCG CTTTCCGAAG CGCTCTGATC
GCGCACGCCA GATCGGCGCT TCCCGCACCC GGCGAAGCGG CCCTCAACCA GCGCCAGCAC
ACCCATCTTT CGGAAGTCGC CCGGGCACTT GAAGACGCCG CCGCCGAACA GGATCCGCTA
CTTGCCGCCG AAAACCTGCG CCTCGGTCGC CGCGGCCTCG ACGCCTTGGT AGGACGAACC
GGCACCGAAG ACATGCTGGA CACTCTTTTC GGCCGCTTCT GCATCGGCAA GTAG
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| Protein sequence | MTDTIFALSS GQPPAGIGVI RISGPGAGAA LSSLAGRLPS PRRATLATLA DPRDGTHLDR
TMVLWLPGPA TATGEDCAEL HLHGGRAVIA AVEAALSSLP GLRRARPGEF TRRAFANGRI
DLAEAEGLAD LLSAETELQR RTALAMAEGA LSREVDEWRT TLLQISARLE AALDFSDEDD
VGAGDGTQRA SLLPPHFAAD CISLACSLNT WLDRPRAEPL KEGFRVVLAG PPNAGKSTLF
NALVEHEAAI TAAEPGTTRD LLTHAAALDG VPFTFVDTAG LRDEGAGEIE RIGIARARAA
AEKADLILWL GPEGLGPAGR TLWEIAARAD DPGAGRKSQC AFHLSAVTGE GMAAFRSALI
AHARSALPAP GEAALNQRQH THLSEVARAL EDAAAEQDPL LAAENLRLGR RGLDALVGRT
GTEDMLDTLF GRFCIGK
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