Gene Saro_0130 details

Gene Information

• Locus tag: Saro_0130
• ID: 3916016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 133354
• End bp: 133836
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640442855
• Product: putative GAF sensor protein
• Protein accession: YP_495413
• Protein GI: 87198156
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1956] GAF domain-containing protein

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACTT TTGCACCCAC GGAAGGCCAT TCGCGGGCCG AACTCCACGC CGACCTTCTC 
GAAGCCGCGC GCGCACTGAC CGATGGTGAA CCCGACGGTG TCGCCAACAT GGCCAACGTG 
GCCGCGCTGA TCTGGCAGTT CCTGCCGGAT CTCAATTGGG CGGGCTTCTA TCGCATGGTC 
GAGGGCGAAC TTGTTCTCGG GCCTTTCGTC GGCAAGCCCG CCTGTATCCG CATTCCCCTG 
GGCAAGGGTG TATGCGGAAC CGCAGCCGCA AGCGGCGAGA CCCAGCTTGT GGCCGATGTC 
CATGCCTTTC CGGGCCACAT CGCCTGCGAC GCGGCAAGCC GGTCCGAACT GGTCGTTCCT 
GTCCTGCGGG ATGGTGGGGT GATCGCGGTG ATCGATCTCG ACAGCCCCTC GCCCTCGCGC 
TTCGATGAAG AGGATGCGCG CGGTATCGAA GCACTGGCAC GGGCCATGGC TCACCGCATC 
TGA 

 

Protein sequence

MFTFAPTEGH SRAELHADLL EAARALTDGE PDGVANMANV AALIWQFLPD LNWAGFYRMV 
EGELVLGPFV GKPACIRIPL GKGVCGTAAA SGETQLVADV HAFPGHIACD AASRSELVVP 
VLRDGGVIAV IDLDSPSPSR FDEEDARGIE ALARAMAHRI