| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0115 |
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| Symbol | |
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| ID | 3916001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 117217 |
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| End bp | 118089 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640442840 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_495398 |
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| Protein GI | 87198141 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCACGT CGCCGAAGAC ACTGCCGTAT GCCGAGGTGA TCGGGGACCC GATCGCGCAG
TCCAAATCGC CGGTGATCCA CGGGTTCTGG CTGGAAGCGC TTGGCCTCGA AGGCGATTAT
CGCCGTGCCC ACGTCAGGGC CGGGGAACTG GCAGATTACC TTGCTGCCCG GCGTGCGGAC
ACAGACTGGC GTGGTTGCAA CGTGACGATG CCGCACAAGC AGGCGGTGAT CCCGCTTCTC
GACCGGCTCG ACCCGCTCGC CGCCCGGATC GGCGCGGTCA ATACCATCGT GCCCGAGGAC
GGCGCATTGG TCGGATACAA TACCGATGCG CCTGGCTTCC TCGAACCCCT GCGGCCATTG
CTCGATCAGG TGCATTACTT CCGCATGGCG CGCGTCCTCG GGACCGGCGG CGCGGCGCGC
GCAATCATTG CCGCACTGGC GGACGAGCAC ATGGTGATCG TGCTGGCGGG CCGAAACGTC
GAGAAGGCCC GTGCGCTTCT CGATGAACTC CATCCTGAAG GGGAGCACCA CGTCGCCCCG
CTCGAACACT TCTCTGACGA GACCGATTTC GTCTTCGATG ACCGCGAAGG ATGCCTCGAC
CTCGTCGTCA ACGCTTCGTC GCTGGGCATG ACAGGGCAGC CACCGCTTGC CTTTGACATG
ACACATGCGC CGCCGGGCTC GGTCTTCTAC GACATCGTCA CCAGCCCGCT CGAAACCGAT
TTCCTCAAGA CAGCGAAGGC AGCAGGCTTC CGCACGGTCG ATGGGCTTTC GATGCTCATC
GGACAGGCCG ACCATGCCTT TCGCCGCTTC TTCGGCGCGG TGCCTCCGCG GGGCGAGGCA
GATGCGCAAC TTCGTGAAAG GTTGCTGGCA TGA
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| Protein sequence | MSTSPKTLPY AEVIGDPIAQ SKSPVIHGFW LEALGLEGDY RRAHVRAGEL ADYLAARRAD
TDWRGCNVTM PHKQAVIPLL DRLDPLAARI GAVNTIVPED GALVGYNTDA PGFLEPLRPL
LDQVHYFRMA RVLGTGGAAR AIIAALADEH MVIVLAGRNV EKARALLDEL HPEGEHHVAP
LEHFSDETDF VFDDREGCLD LVVNASSLGM TGQPPLAFDM THAPPGSVFY DIVTSPLETD
FLKTAKAAGF RTVDGLSMLI GQADHAFRRF FGAVPPRGEA DAQLRERLLA
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