Gene Saro_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0113 
Symbol 
ID3915999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp115877 
End bp116569 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content64% 
IMG OID640442838 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_495396 
Protein GI87198139 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATGCGTG AGATCGTTTT CGACACCGAA ACGACCGGGC TCGACCCAAG AAGCGGCGAT 
CGGCTGGTCG AGATCGGTTG CATCGAAATG TTCAACCGCG TGCCGACGGG CGCGGTTTTC
CATTGCTACT TCAATCCCGA ACGCGACATG CCGGCCGAGG CTGAGGCCGT CCACGGCTTG
TCTATCGCGT TCCTGTCCGA CAAGCCGAAG TTCGCCGAGA AGGCGGACGA TCTGCTGGCG
TTCATCGCGG ACTCGCCGAT GGTCGCGCAC AATGCGGGCT TCGACTTCGG ATTCATCAAC
AACGAGCTGG AGCTGTGCGG GCGCGAACCC GTCAGCCGTG ACCGGATGGT CGATACGGTG
GCGATTGCCC GCCGCAAGCA TCCCGGTGCG AAGCTCAGCC TCGACGCCTT GTGCTCGCGC
TACGGAATCG ACCGCAGCCA CCGCACCAAG CATGGGGCGC TACTGGACGC GGAACTGCTC
GCGCAGCTCT ATGTGGAGCT GCAGGGCGGG CGGCAGATCG GTCTCGAACT CGCGGCGCAA
TCCGCGATTG CTGTGACCGA AGAGGTCGTG ACCGTCACTT CGTCGGTCAC ACGCGTGTTC
CGTTCCCCGC GCCCGCATTC CGCGAGCGCA GAGGAGCTGG CCCGACATGC CGAGTTCATG
GCGGGCTTCA GCGAGCCGAT CTGGTCGCGC TGA
 
Protein sequence
MMREIVFDTE TTGLDPRSGD RLVEIGCIEM FNRVPTGAVF HCYFNPERDM PAEAEAVHGL 
SIAFLSDKPK FAEKADDLLA FIADSPMVAH NAGFDFGFIN NELELCGREP VSRDRMVDTV
AIARRKHPGA KLSLDALCSR YGIDRSHRTK HGALLDAELL AQLYVELQGG RQIGLELAAQ
SAIAVTEEVV TVTSSVTRVF RSPRPHSASA EELARHAEFM AGFSEPIWSR