Gene Saro_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0111 
Symbol 
ID3915997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp114602 
End bp115063 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content65% 
IMG OID640442836 
ProductPTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_495394 
Protein GI87198137 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCTC TCTTCACGAT CAGTCCCCAG GCCGTCCGCG TTATCCGCGC GGAGACGAAG 
CAGCAGATCC TTGCGGATCT GTCGCGCTGC TTCGCCGAGG TCTACGCGCT CGACGCCGAG
ACCGTGATCG AGGGCATCGA GGAACGCGAG AAGCTGGGCA GCACTGGCTT TGGCCGGGGC
GTGGCTATTC CCCACGCGCG GATCGACGGT CTGGAAAAGC CGGTCGCGGC CTTCTTCCGC
CTTGAAAATC CGGTCGAATT CGCCGCTGCG GATGGCATGC CGGTCGATTG CGTGTTCGGC
CTGCTCTCCC CCGCCCAGGC GGGAGCCACC CATCTCCAGG CGCTGGCCGC GATTTCGCGC
CTGATGCGTG ATGAGCGCAT GCACGAACGT CTGGTCTCCG CGCCCGATGC AGAGGCCATC
TACGGCCTGC TGGTCAATGT CATCGATCGT GACGCCGCCT GA
 
Protein sequence
MTALFTISPQ AVRVIRAETK QQILADLSRC FAEVYALDAE TVIEGIEERE KLGSTGFGRG 
VAIPHARIDG LEKPVAAFFR LENPVEFAAA DGMPVDCVFG LLSPAQAGAT HLQALAAISR
LMRDERMHER LVSAPDAEAI YGLLVNVIDR DAA