Gene Saro_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0078 
Symbol 
ID3918509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp80685 
End bp81668 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content69% 
IMG OID640442803 
Producthypothetical protein 
Protein accessionYP_495361 
Protein GI87198104 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCA CCATCCGCGG CAGATTGCCG CTTGTCGCTT CCCTGGCCGC ACTGGGCCTC 
GGGCTTGGCT TGCCTCTCGC CGTTCCGGTC GCTGCGCAAT CGTCGACCAC CAAGGCGACG
ACGCAGGTCG ATCCCGAAAT GCGGCTGCGG CGGATGGAGG CGGAAATCCG CGCGATCCAG
CGCAAGGTCT TTCCGGACGG CGCAGGCAAG ACCTTCGTCC CCGAAATCAC GCCCGGGCAG
TCGACGGCCG CGCCGGTCGG CACGCCTGCC GCGCCTGCGG TCAGCGACCT GCTGGCGCGG
ATGGATGCGG TCGAAGCGCA GCTTTCGCGC ATGACCGCGC AGATCGAGGA AGGCCAGAAC
CGCGCCGCTC GCCTCGAAGA GCGTCTGGCA AAGCTCGAAG CCGCCGCCGC GCCGCCCCCG
GCGGAAGAAC CTGCGGCCGA AGCTCCCGCC GTTCCTGCCG CGAAGCCGGC GGCCGTCACG
CCTGCTCCGG CCAAGCCCGC CGCTACCCCG GCGAAGCCAG CGGCCGGCAA ACCCGTCGCA
CCGCCCGCCG CGCGTGTCGC AGCGGTCCAG GCGATCGAAA AGCCATCGAC CGGCGATGCC
GGGATGGACG AATACAGCTA TGGCTTCCGC CTGTGGGAGG GGAAGTTCTT CCCCGAGGCG
CAGCAGCAGC TCCAGATCTT TGTCGACCGC TATCCCAAGC ACCGCATGAT CAGCTTCGGC
CGCAACCTGC TGGGCCGTGC CTGGCTCGAC GATGGAAAGC CGGGAACCGC CGCGCAGTTC
TTCCTGCAGA ATTACCTGGC CGACAAGAAG GGGGCCCGCG CGCCGGACAG CCTGCTCTAC
CTCGGCGTCG CCATGGTCAA GCTGAAGGAC ACCGAGAAAG CCTGTGGCGC CTTCGCCGAA
CTCGCCGCGA CCTATCCCGA CGAAGTCGCC GGCCGCCTCA AGGGCCAGTA CGATGCCGCG
CGCGCCGGGG TGAAGTGCAA GTGA
 
Protein sequence
MTITIRGRLP LVASLAALGL GLGLPLAVPV AAQSSTTKAT TQVDPEMRLR RMEAEIRAIQ 
RKVFPDGAGK TFVPEITPGQ STAAPVGTPA APAVSDLLAR MDAVEAQLSR MTAQIEEGQN
RAARLEERLA KLEAAAAPPP AEEPAAEAPA VPAAKPAAVT PAPAKPAATP AKPAAGKPVA
PPAARVAAVQ AIEKPSTGDA GMDEYSYGFR LWEGKFFPEA QQQLQIFVDR YPKHRMISFG
RNLLGRAWLD DGKPGTAAQF FLQNYLADKK GARAPDSLLY LGVAMVKLKD TEKACGAFAE
LAATYPDEVA GRLKGQYDAA RAGVKCK