| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0076 |
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| Symbol | |
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| ID | 3918226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 77647 |
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| End bp | 79581 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640442801 |
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| Product | membrane protease FtsH catalytic subunit |
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| Protein accession | YP_495359 |
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| Protein GI | 87198102 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.597348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG ACCAGCCCCA GGGCAATCCT TGGATCAAGA GCCTCCTCGT CTGGGGCGGC
ATCTTCCTTG CACTCCTGCT GGTCGTCTCG ATGTTCGGCT CGCGGGTTGA CCAGACCGCT
GCGACCATCC CCTATTCGGC CTTCCGCTCG CAGGTCAGCG ACGGCCTCGT CCGCTCGGTG
GAGATCGCGC CTGAGCGCAT TACCGGTACG CTCAAGAACG GTGGCCAGTT CGCGACCATT
CCGGTCCCCG GCGACTCCGA CCTGCCCAAG CTGCTGCAGG ACAACGGCGT GCAGTATGCC
GGCAAGGCGG CCGAGCAGCC GAACATGCTG ATGTACATAC TCGTCAATTC GCTGCCGTTC
CTGCTGATCC TGGGCGTCGC GTTCTTCGCG CTGCGGCAGG TGCAGAAGGG CGGCGGGTCG
GGCGCAATGG GCTTCGGCAA GTCGAAGGCC AAGATGCTGA CCGAGCGTTC GGGCCGTGTC
ACCTTCGACG ACGTTGCCGG CATCGACGAA GCGCGCGAGG AACTTCAGGA AATCGTCGAG
TTCCTGCGCG ATCCCTCGCG CTTTTCGAAG CTCGGCGGCC AGATTCCCAA GGGCGCGCTG
CTGGTCGGCT CGCCCGGTAC CGGCAAGACC TTGCTCGCCC GCGCCATCGC GGGTGAGGCG
GGCGTCCCCT TCTTCACGAT CTCCGGTTCT GATTTCGTCG AGATGTTCGT CGGCGTCGGT
GCAAGCCGCG TGCGCGACAT GTTCGAGCAG GCCAAGAAGA ACGCACCGTG CATCGTCTTC
ATCGACGAAA TCGACGCGGT CGGCCGCCAT CGCGGCCACG GCCTCGGCAA TTCGAACGAC
GAGCGCGAGC AGACGTTGAA CCAGCTCCTC GTCGAGATGG ACGGGTTCGA GGCCAACGAA
GGCATCATCA TCATCGCGGC GACCAACCGC CCCGACGTGC TCGACCCCGC GCTGCTGCGC
CCGGGCCGCT TCGACCGGCA GGTCGTCGTG CCGATCCCGG ACATCGAAGG GCGCGAGAAG
ATCCTTTCGG TCCACATGAA GAAGGTGCCG CTGGCGCCCG ACGTCAATCC GCGCACCATC
GCGCGCGGCA CGCCCGGTTT TTCGGGCGCG GACCTCGCCA ACCTCGTCAA CGAAGCCGCC
CTGCTCGCCG CGCGCCGCAA CAAGCGTCTC GTCGCGATGC AGGAGTTCGA GGACGCCAAG
GACAAGGTCA TGATGGGCGC GGAACGCCGC TCGATGGTCA TGACCGACGA CGAGAAGAAG
ATGACCGCCT ATCACGAGGC CGGGCACGCC ATCGTCTCTG TCCACGAGCC TGCGTCCGAC
CCAATCCACA AGGCAACGAT CATCCCGCGC GGCCGCGCGC TGGGCATGGT CATGCGCCTG
CCCGAGCGGG ACAGCTATTC CTACCACCGC GACAAGATGC ACGCGAACCT CTCGGTCTCG
ATGGGCGGTC GCGTGGCCGA AGAGATCATC TTCGGGCACG ACAAGGTCTC GTCGGGTGCC
TCCTCGGACA TCCAGTACGC CACGTCGCTG GCGCGCTCGA TGGTCACCAA GTGGGGTATG
TCGGACAAGC TCGGCCCGCT GCAGTACGAG GACCAGCAGG AAGGCTACCT CGGCATGGGC
GGTTCGCAGC GCCTGTTCGT CTCGGACGAG ACCAACAAGC TGATCGACAT GGAAATCCGT
GGTCTGGTCG ACGGCGCACA CGAGCGCGCG CGCGATATCC TCAAGACCAA CGAGGACAAG
CTGCATCTCC TCGCTCAGGC GCTGCTCGAA TACGAGACGC TGACCGGCGA CGAGATCAAG
GAACTGCTCG AGACAGGTCA CATCGACCGG CCGCAAAGCC CGAGCGGCCC CTCGCGTCCG
GTCACCGCGC AGGGTTCAGC TGTGCCGCGC GCCGGCAAGA AGTTCGGCGG TTCGGCCAGT
CCGCAACCGG CCTGA
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| Protein sequence | MNDDQPQGNP WIKSLLVWGG IFLALLLVVS MFGSRVDQTA ATIPYSAFRS QVSDGLVRSV
EIAPERITGT LKNGGQFATI PVPGDSDLPK LLQDNGVQYA GKAAEQPNML MYILVNSLPF
LLILGVAFFA LRQVQKGGGS GAMGFGKSKA KMLTERSGRV TFDDVAGIDE AREELQEIVE
FLRDPSRFSK LGGQIPKGAL LVGSPGTGKT LLARAIAGEA GVPFFTISGS DFVEMFVGVG
ASRVRDMFEQ AKKNAPCIVF IDEIDAVGRH RGHGLGNSND EREQTLNQLL VEMDGFEANE
GIIIIAATNR PDVLDPALLR PGRFDRQVVV PIPDIEGREK ILSVHMKKVP LAPDVNPRTI
ARGTPGFSGA DLANLVNEAA LLAARRNKRL VAMQEFEDAK DKVMMGAERR SMVMTDDEKK
MTAYHEAGHA IVSVHEPASD PIHKATIIPR GRALGMVMRL PERDSYSYHR DKMHANLSVS
MGGRVAEEII FGHDKVSSGA SSDIQYATSL ARSMVTKWGM SDKLGPLQYE DQQEGYLGMG
GSQRLFVSDE TNKLIDMEIR GLVDGAHERA RDILKTNEDK LHLLAQALLE YETLTGDEIK
ELLETGHIDR PQSPSGPSRP VTAQGSAVPR AGKKFGGSAS PQPA
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