| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0067 |
|---|
| Symbol | |
|---|
| ID | 3917666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 68777 |
|---|
| End bp | 69850 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640442792 |
|---|
| Product | putative mRNA 3-end processing factor |
|---|
| Protein accession | YP_495350 |
|---|
| Protein GI | 87198093 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAGG GCCACCCGGC ACCAAGGGCA CTGGAACCCG AAGCCGCGAC CGGCCATTTC
ATGACAATGG CCCCGCCCTT TTCCTGGCTT CGACCCGAAC CGCACGGCCT TCACGTGGTG
CCGGCCGACG CCTGGGTCGA TCCGGCGCGT GCCGTCGACA CCGCCCTCGT CACCCACGGC
CACGCCGATC ATGCGCGCGG CGGGCACGGC CGCACGGTCG CCACACCCGA GACGCTGGCG
ATCATGGCGC TGCGCTATGG CGTCATGGAG GCAGGCTCGC AGCCGGTGGG TTATGGCGAG
ACGGTTACGC TGCGCGGCGA CGTGCGGGCG ACCTATTACC CGGCGGGCCA TGTCCTGGGT
TCCGCCCAGA TCCTGCTTGA ACACGCGGGC GAGCGGGTCA TCATCACGGG CGACTACAAG
CGTCGCCCCG ATCCCACCTG CCCGCCCTTC GAGGTCGTGC CCTGCGACGT GTTCGTCACC
GAAGCGACCT TCGGCCTTCC GGTCTTCCGC CACCCGCCCA TCGCGCAGGA GATGGGCAAA
CTTCTGGCCG CCCGCGAGAA CGACGCGGGC CGCTGCGTCC TCGTGGGCGC CTATGCCCTG
GGCAAGGCGC AGCGCGTCAT CGCGGAGCTG CGCGCCGCAG GCTTCGCCGA CACCATCTGG
CTCCATGGCG CCATGGAGCG GATGTGCCGT CTCTATGAGG ATCACGGCGT CGACCTGGGC
GATCTCAGGC CGGTGGCGGG CGTGCCCAAG GCGGCGCTGG CCAATGCCGT GATCGTCTGC
CCGCCATCGG CGCTCAACGA CCGCTGGAGC CGACGCCTTC CCGATCCGGT GACCGCAATG
GCATCTGGCT GGATGCGGGT CCGCCAGCGC GTTCGCCAGC GCAACGTCGA ACTGCCGCTG
GTCATTTCCG ACCACGCCGA CTGGGACGAG CTGACCGCCA CCATCGCGGA TGTGAACCCG
TCCGAGACAT GGATCACCCA CGGGCGGGAG GAGGCGCTCC TGCGATGGTG CGAACTCACC
CAGCGCCGGG CGCGGGCACT GGCGCTTGCA GGATACGAGG ACGAGGATGA TTGA
|
|---|
| Protein sequence | MRQGHPAPRA LEPEAATGHF MTMAPPFSWL RPEPHGLHVV PADAWVDPAR AVDTALVTHG
HADHARGGHG RTVATPETLA IMALRYGVME AGSQPVGYGE TVTLRGDVRA TYYPAGHVLG
SAQILLEHAG ERVIITGDYK RRPDPTCPPF EVVPCDVFVT EATFGLPVFR HPPIAQEMGK
LLAARENDAG RCVLVGAYAL GKAQRVIAEL RAAGFADTIW LHGAMERMCR LYEDHGVDLG
DLRPVAGVPK AALANAVIVC PPSALNDRWS RRLPDPVTAM ASGWMRVRQR VRQRNVELPL
VISDHADWDE LTATIADVNP SETWITHGRE EALLRWCELT QRRARALALA GYEDEDD
|
|---|
| |