Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0066 |
Symbol | |
ID | 3917665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 66339 |
End bp | 68717 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640442791 |
Product | ATP dependent Clp protease |
Protein accession | YP_495349 |
Protein GI | 87198092 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.970057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAGTT TCGCCCAGAG CCTCGAGAAG ACGCTGCACA CCGCGCTCGC CAACGCGTCC GAGCGCAGCC ACGAGTACGC GACTCTCGAG CACCTCCTGC TGGCCCTGAT CGACGATCCG GATGCGGCGC AGGTCATGCA GGCCTGCGGC GTCGACCTCG GCGATCTCGG CGATGTCGTG CGCCAGTACC TCGACCAGGA ATACCAGTCG CTCAAGACGC AGGAGAAGGC CGACCCGCAG CCGACAGCCG GCTTCCAGCG GGTGATCCAG CGCGCCATCC TGCACGTCCA GTCCAGCGGC AAGGACACCG TCACCGGCGC CAACGTGCTG GTCGCGCTGT TCTCCGAACG CGACAGCTAT GCGGTCTATT TCCTGCAGCA GCAGGACATG AGCCGCCTCG ACGCGGTCAG CTTCATCAGC CACGGCATCG GCAAGGGTGG ACGCCAGGTC GATGGCCGCA CGCCCAAGGG CGCCGAGGAG GATGTACCCA AGCAGCAGGA AGAAAAGGCC GACGCCAAGG GGCAGAAGAA GGAAACCGCT CTCGACCAGT TCTGCGTCAA CCTCAACGAG AAGGCGCTGG CGGGCAAGGT CGATCCGCTG ATCGGGCGCG GGCCGGAAGT GGATCGCACG ATCCAGATCC TGTGCCGCCG CAGCAAGAAC AACCCGCTCT ACGTGGGCGA TCCCGGCGTG GGCAAGACCG CCATCGCCGA GGGCCTCGCG CGCAAGATCG TCGAGGGCGA AGTGCCCGAG GTCCTCTCCG AGGCGGTGAT CTATTCGCTC GACATGGGCA GCCTGCTCGC CGGCACCCGC TATCGCGGCG ACTTCGAGGA ACGCCTCAAG CAGGTCGTCT CCGAGCTCGA GAAGATGCCG CACGCGATCC TGTTCATCGA CGAGATCCAT ACCGTGATCG GCGCCGGCGC GACCAGCGGC GGGGCGATGG ACGCTTCGAA CCTGCTCAAG CCCGCGCTTT CGGGCGGGAC CATCCGCTGC ATCGGCTCGA CCACCTACAA GGAGTTCCGC AACCACTTCG AAAAGGACCG CGCCCTGCTG CGCCGGTTCC AGAAGATCGA CGTGAACGAA CCCACAGTCG AGGACACGAT CAAGATCCTC AAGGGCCTGC GCACGGCGTT CGAGGAACAC CACAAGGTCA AGTACACGCC CGACGCGATC AAGACCGCGG TCGAGCTTTC CGCGCGCTAC ATCAACGACC GCAAGCTGCC CGACAAGGCG ATCGACGTGA TCGACGAAGT GGGCGCGATG CAGATGCTGG TGCCGCCCTC GAAGCGCAAG AAGACCATCA CCGCGCGCGA GATCGAGCAG GTCATCGCGA CCATGGCCCG CATCCCGCCC AAGTCGGTGT CGAGCGACGA CAAGAAGGTC CTCGAACACC TCGAACGCGA CCTGAAGCGC CTCGTGTTCG GGCAGGACAA GGCGATCGAG GTGCTGTCCT CGGCGATGAA GCTCAGCCGC GCGGGCCTGC GCGATCCGGA CAAGCCGATC GGCTCGTTCC TTTTCTCGGG CCCGACCGGC GTCGGCAAGA CCGAGGTTGC CCGCAGCCTT GCCCAGATCA TGGGCATTCC GCTGCAGCGC TTCGACATGT CCGAATACAT GGAGCGCCAC TCGGTCTCGC GCCTGATCGG CGCACCTCCG GGCTATGTCG GCTTCGACCA GGGCGGTCTT CTCACTGATG CCATCGACCA GCAGCCGCAC TGCGTCCTGC TGCTCGACGA GATCGAGAAG GCGCACCCCG ACCTGTTCAA CATCCTGCTC CAGGTGATGG ACAACGGCCG CCTGACCGAC CACCACGGCA AGACCGTCGA CTTCCGCAAC GTGGTCCTGA TCATGACCAC CAATGCGGGC GCTTCGGACA TGGCGCGCCA GGGCATCGGC TTCGGCGACG TGTCGAAGGC GGACGCGGGC GACGAGGCGG TGAAGAAGAT GTTCACCCCC GAGTTCCGCA ACCGCCTCGA TGCCATCGTG CCCTTCGCGT ACCTGCCGCC CGAAGTCGTC AGCCGCGTCG TCGACAAGTT CGTGCTCCAG CTCGAACTCC AGCTTGCCGA CCAGAACGTG CACATCCAGT TCGATGCCGA TGCGCGCGCC TGGCTGGCGA AGAAGGGCTA TGACCGCCTC TATGGCGCGC GGCCGATGGC CCGCGTGATC CAGGAAAAGG TCAAGAAGCC GCTGGCCGAG GAATTGCTGT TCGGCAAGCT CGCCAATGGC GGCGAGGTCC ATGTCAGCCT CAAGCAGGAG GAGGGCCAGG AAGGCGCCCT CTCGTTCGAG CTGACCCCGG CCGCGCCGAA GCTGGTCAAC AAGAAGAAGG GCAAGAAGAG CAAGGCGGGC GATACCACCG CCGAGGAACC CAACGCCGAC GAGGCCTGA
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Protein sequence | MPSFAQSLEK TLHTALANAS ERSHEYATLE HLLLALIDDP DAAQVMQACG VDLGDLGDVV RQYLDQEYQS LKTQEKADPQ PTAGFQRVIQ RAILHVQSSG KDTVTGANVL VALFSERDSY AVYFLQQQDM SRLDAVSFIS HGIGKGGRQV DGRTPKGAEE DVPKQQEEKA DAKGQKKETA LDQFCVNLNE KALAGKVDPL IGRGPEVDRT IQILCRRSKN NPLYVGDPGV GKTAIAEGLA RKIVEGEVPE VLSEAVIYSL DMGSLLAGTR YRGDFEERLK QVVSELEKMP HAILFIDEIH TVIGAGATSG GAMDASNLLK PALSGGTIRC IGSTTYKEFR NHFEKDRALL RRFQKIDVNE PTVEDTIKIL KGLRTAFEEH HKVKYTPDAI KTAVELSARY INDRKLPDKA IDVIDEVGAM QMLVPPSKRK KTITAREIEQ VIATMARIPP KSVSSDDKKV LEHLERDLKR LVFGQDKAIE VLSSAMKLSR AGLRDPDKPI GSFLFSGPTG VGKTEVARSL AQIMGIPLQR FDMSEYMERH SVSRLIGAPP GYVGFDQGGL LTDAIDQQPH CVLLLDEIEK AHPDLFNILL QVMDNGRLTD HHGKTVDFRN VVLIMTTNAG ASDMARQGIG FGDVSKADAG DEAVKKMFTP EFRNRLDAIV PFAYLPPEVV SRVVDKFVLQ LELQLADQNV HIQFDADARA WLAKKGYDRL YGARPMARVI QEKVKKPLAE ELLFGKLANG GEVHVSLKQE EGQEGALSFE LTPAAPKLVN KKKGKKSKAG DTTAEEPNAD EA
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