| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0066 |
|---|
| Symbol | |
|---|
| ID | 3917665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 66339 |
|---|
| End bp | 68717 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640442791 |
|---|
| Product | ATP dependent Clp protease |
|---|
| Protein accession | YP_495349 |
|---|
| Protein GI | 87198092 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.970057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGTT TCGCCCAGAG CCTCGAGAAG ACGCTGCACA CCGCGCTCGC CAACGCGTCC
GAGCGCAGCC ACGAGTACGC GACTCTCGAG CACCTCCTGC TGGCCCTGAT CGACGATCCG
GATGCGGCGC AGGTCATGCA GGCCTGCGGC GTCGACCTCG GCGATCTCGG CGATGTCGTG
CGCCAGTACC TCGACCAGGA ATACCAGTCG CTCAAGACGC AGGAGAAGGC CGACCCGCAG
CCGACAGCCG GCTTCCAGCG GGTGATCCAG CGCGCCATCC TGCACGTCCA GTCCAGCGGC
AAGGACACCG TCACCGGCGC CAACGTGCTG GTCGCGCTGT TCTCCGAACG CGACAGCTAT
GCGGTCTATT TCCTGCAGCA GCAGGACATG AGCCGCCTCG ACGCGGTCAG CTTCATCAGC
CACGGCATCG GCAAGGGTGG ACGCCAGGTC GATGGCCGCA CGCCCAAGGG CGCCGAGGAG
GATGTACCCA AGCAGCAGGA AGAAAAGGCC GACGCCAAGG GGCAGAAGAA GGAAACCGCT
CTCGACCAGT TCTGCGTCAA CCTCAACGAG AAGGCGCTGG CGGGCAAGGT CGATCCGCTG
ATCGGGCGCG GGCCGGAAGT GGATCGCACG ATCCAGATCC TGTGCCGCCG CAGCAAGAAC
AACCCGCTCT ACGTGGGCGA TCCCGGCGTG GGCAAGACCG CCATCGCCGA GGGCCTCGCG
CGCAAGATCG TCGAGGGCGA AGTGCCCGAG GTCCTCTCCG AGGCGGTGAT CTATTCGCTC
GACATGGGCA GCCTGCTCGC CGGCACCCGC TATCGCGGCG ACTTCGAGGA ACGCCTCAAG
CAGGTCGTCT CCGAGCTCGA GAAGATGCCG CACGCGATCC TGTTCATCGA CGAGATCCAT
ACCGTGATCG GCGCCGGCGC GACCAGCGGC GGGGCGATGG ACGCTTCGAA CCTGCTCAAG
CCCGCGCTTT CGGGCGGGAC CATCCGCTGC ATCGGCTCGA CCACCTACAA GGAGTTCCGC
AACCACTTCG AAAAGGACCG CGCCCTGCTG CGCCGGTTCC AGAAGATCGA CGTGAACGAA
CCCACAGTCG AGGACACGAT CAAGATCCTC AAGGGCCTGC GCACGGCGTT CGAGGAACAC
CACAAGGTCA AGTACACGCC CGACGCGATC AAGACCGCGG TCGAGCTTTC CGCGCGCTAC
ATCAACGACC GCAAGCTGCC CGACAAGGCG ATCGACGTGA TCGACGAAGT GGGCGCGATG
CAGATGCTGG TGCCGCCCTC GAAGCGCAAG AAGACCATCA CCGCGCGCGA GATCGAGCAG
GTCATCGCGA CCATGGCCCG CATCCCGCCC AAGTCGGTGT CGAGCGACGA CAAGAAGGTC
CTCGAACACC TCGAACGCGA CCTGAAGCGC CTCGTGTTCG GGCAGGACAA GGCGATCGAG
GTGCTGTCCT CGGCGATGAA GCTCAGCCGC GCGGGCCTGC GCGATCCGGA CAAGCCGATC
GGCTCGTTCC TTTTCTCGGG CCCGACCGGC GTCGGCAAGA CCGAGGTTGC CCGCAGCCTT
GCCCAGATCA TGGGCATTCC GCTGCAGCGC TTCGACATGT CCGAATACAT GGAGCGCCAC
TCGGTCTCGC GCCTGATCGG CGCACCTCCG GGCTATGTCG GCTTCGACCA GGGCGGTCTT
CTCACTGATG CCATCGACCA GCAGCCGCAC TGCGTCCTGC TGCTCGACGA GATCGAGAAG
GCGCACCCCG ACCTGTTCAA CATCCTGCTC CAGGTGATGG ACAACGGCCG CCTGACCGAC
CACCACGGCA AGACCGTCGA CTTCCGCAAC GTGGTCCTGA TCATGACCAC CAATGCGGGC
GCTTCGGACA TGGCGCGCCA GGGCATCGGC TTCGGCGACG TGTCGAAGGC GGACGCGGGC
GACGAGGCGG TGAAGAAGAT GTTCACCCCC GAGTTCCGCA ACCGCCTCGA TGCCATCGTG
CCCTTCGCGT ACCTGCCGCC CGAAGTCGTC AGCCGCGTCG TCGACAAGTT CGTGCTCCAG
CTCGAACTCC AGCTTGCCGA CCAGAACGTG CACATCCAGT TCGATGCCGA TGCGCGCGCC
TGGCTGGCGA AGAAGGGCTA TGACCGCCTC TATGGCGCGC GGCCGATGGC CCGCGTGATC
CAGGAAAAGG TCAAGAAGCC GCTGGCCGAG GAATTGCTGT TCGGCAAGCT CGCCAATGGC
GGCGAGGTCC ATGTCAGCCT CAAGCAGGAG GAGGGCCAGG AAGGCGCCCT CTCGTTCGAG
CTGACCCCGG CCGCGCCGAA GCTGGTCAAC AAGAAGAAGG GCAAGAAGAG CAAGGCGGGC
GATACCACCG CCGAGGAACC CAACGCCGAC GAGGCCTGA
|
|---|
| Protein sequence | MPSFAQSLEK TLHTALANAS ERSHEYATLE HLLLALIDDP DAAQVMQACG VDLGDLGDVV
RQYLDQEYQS LKTQEKADPQ PTAGFQRVIQ RAILHVQSSG KDTVTGANVL VALFSERDSY
AVYFLQQQDM SRLDAVSFIS HGIGKGGRQV DGRTPKGAEE DVPKQQEEKA DAKGQKKETA
LDQFCVNLNE KALAGKVDPL IGRGPEVDRT IQILCRRSKN NPLYVGDPGV GKTAIAEGLA
RKIVEGEVPE VLSEAVIYSL DMGSLLAGTR YRGDFEERLK QVVSELEKMP HAILFIDEIH
TVIGAGATSG GAMDASNLLK PALSGGTIRC IGSTTYKEFR NHFEKDRALL RRFQKIDVNE
PTVEDTIKIL KGLRTAFEEH HKVKYTPDAI KTAVELSARY INDRKLPDKA IDVIDEVGAM
QMLVPPSKRK KTITAREIEQ VIATMARIPP KSVSSDDKKV LEHLERDLKR LVFGQDKAIE
VLSSAMKLSR AGLRDPDKPI GSFLFSGPTG VGKTEVARSL AQIMGIPLQR FDMSEYMERH
SVSRLIGAPP GYVGFDQGGL LTDAIDQQPH CVLLLDEIEK AHPDLFNILL QVMDNGRLTD
HHGKTVDFRN VVLIMTTNAG ASDMARQGIG FGDVSKADAG DEAVKKMFTP EFRNRLDAIV
PFAYLPPEVV SRVVDKFVLQ LELQLADQNV HIQFDADARA WLAKKGYDRL YGARPMARVI
QEKVKKPLAE ELLFGKLANG GEVHVSLKQE EGQEGALSFE LTPAAPKLVN KKKGKKSKAG
DTTAEEPNAD EA
|
|---|
| |