Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0055 |
Symbol | |
ID | 3917652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 56435 |
End bp | 57826 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640442780 |
Product | C-terminal processing peptidase-3 |
Protein accession | YP_495338 |
Protein GI | 87198081 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCTC ACTCGCGAAA GGCCCCCAGG GCAATGAAGT CCGCCTCCTT CAAGTTCGCC GGACTCCTGC GCGTCACCGC GCTCGTTTCT GCCGTCGCGC TCATTCCCGC CACGACCGCC GGCCTCGCTG CGGTCGATGC CCGCACCGGC CCCGAATTCG GCAAGCTCAT CGCGGTCTAC GAGCGGGTGA AGGCCAACTA CGTCGAGCCG GTCGACGACG AGAAGCTCCT CAAGGGCGCG ATCGACGGCA TGCTCGCCAC GCTCGACCCC CACAGCTCCT ATCTCGACGC CCGCGATTTC GAGAACCTGC GCACCCAGAC CGAAGGCTCC TACGGCGGCC TCGGCCTGTC GGTCACGATG GACGACGGCG CGGTGAAGGT CATCGCGCCG ACCAAGGGCA GCCCCGCAGA CCTCGCCGGG GTCAAGGCGG GCGATTTCAT CACGCACCTC GATGGCAAGC TGATCTACGG CGGCTCGCTT GACGAGGCGG TCGACCAGAT GCGCGGCGTG CCGGGCACCA AGATCCGCCT GTCGGTCTTC CGCCCCGGCC GCGACGAGCC GTTCGACGTG ACCATCACCC GCCAGATCAT CGAACTAAAG CCGGTGGAGT GGGAAATGCG CGGCAACGTC GGGGTCATCT CGGTCTCCAG CTTCAGCGCG GACGTCGGCA CCTCTGTCCA GAAGGCGTGG AACGAAATCC GCGCCAGGTC GGGCGGCAAG GTCGCGGGCC TCGTGCTCGA CCTGCGCGGC AATCCGGGCG GACTGCTCGA CGAGGCGGTC GCCCTGTCGG ACCTGTTCCT CGACAAGGGC ACGATCGTGT CGCAGCGTGG CCGGTATGCC CGGGACAACG AGGTCTACCC GGCCGAGATC GATACCAAGG GCGACATCGC CAAGGGCACG CCGATGATCG TGCTGATCGA CGAAGGCTCC GCCTCCGCGT CCGAGATCGT CGCCGGCGCG CTCCAGGACC AGCACCGCGC GGTCGTGATG GGCCAGCGCA GCTTCGGCAA GGGCAGCGTG CAGACGCTGA TCCCGCTGAC GCGCGACACC GCCATCAAGC TCACCACCGC GCGCTACTAT ACGCCTTCGG GCCGTTCGGT GCAGGAAGGC GGGATCGAGC CCGATATCGC CGTGCCGCAG ATTTCCGATC CCGACCTGCG CAAGCGCCAG CTTCGCTCCT ACCGCGAGAG CGACCTGCGC GGCCACCTGA TCAACGAGAT CAAGCTCGAG GACAAGGATC TCGAGAAGGA CAAGACCGAA GACCCGCGCT TCAAGATGAC GGCGGAAGAG CTGAAGGCGA AGGACATCAA GGATTTCCAG CTCTACTACG CGGTCCAGAC CCTGTCGCGC ACCGCGCCCC GTGGTGCACT TGCGGCGAAG GTGAAGGGAT AA
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Protein sequence | MHAHSRKAPR AMKSASFKFA GLLRVTALVS AVALIPATTA GLAAVDARTG PEFGKLIAVY ERVKANYVEP VDDEKLLKGA IDGMLATLDP HSSYLDARDF ENLRTQTEGS YGGLGLSVTM DDGAVKVIAP TKGSPADLAG VKAGDFITHL DGKLIYGGSL DEAVDQMRGV PGTKIRLSVF RPGRDEPFDV TITRQIIELK PVEWEMRGNV GVISVSSFSA DVGTSVQKAW NEIRARSGGK VAGLVLDLRG NPGGLLDEAV ALSDLFLDKG TIVSQRGRYA RDNEVYPAEI DTKGDIAKGT PMIVLIDEGS ASASEIVAGA LQDQHRAVVM GQRSFGKGSV QTLIPLTRDT AIKLTTARYY TPSGRSVQEG GIEPDIAVPQ ISDPDLRKRQ LRSYRESDLR GHLINEIKLE DKDLEKDKTE DPRFKMTAEE LKAKDIKDFQ LYYAVQTLSR TAPRGALAAK VKG
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