Gene Saro_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0045 
Symbol 
ID3917642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp48084 
End bp49208 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content68% 
IMG OID640442770 
Productbeta-lactamase 
Protein accessionYP_495328 
Protein GI87198071 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.975073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCC GTTCGCTCTC CCTTATCCTG ATGATCGCGC TCCTGCCAGC CGTGGCGGGA 
TGTTCGCGGG GGACGAACGC GCCCGATGCA CCGCCGCCGC TGTCCGACGG GGCGCTGGCC
GCCGTCGCGC AGTCCCCCGG CGTCAACCGC GAGAAGCTGG CACGCGCGGT CGATCGGCTG
TTCGACAAGG AAGCCGACGA AACGCGCGCC GTCATCGTGA TGAAGAACGG CCGGATCGTC
GCGGAACGCT ATGGCGAGGG CTATCACGAG AACACCCGCT TCGTGAGCTG GTCGATGGCA
AAGTCGATCA CCGGCGTGAT GATCGGCATG CTGGTGTCGG ACGGACGTCT TCGTCTCGAC
GAGACCGCGC CGGTCCCGGC CTGGCAGCGC CCCGGCGATC CGCGCGGCGA GATCACGCTG
CGCCAACTCC TCCAGATGCG GTCCGGCCTG CGCCATTCCG AGGCGATCGA GCCGGTCTAC
GAATCGGACG AAGTGCGAAT GCTGTTCCTC GACGGACGCG ACGACATGGC GCGCTACGCC
GAAGACCAGC CGCTCGAGGC CGAGCCGGGA CGCCGGTTCG AATACTCGAC GGCGACGAGC
GTCATTCTCG CGGACCTCGC GGCCAGGGTG CTTTCACCCG CGAACGATCC CGAAAGCCGC
CGCCATGCCG TGGCCGAATA CTTGCGCACG CGCCTGTTCG AACCGGCCCG CATGAAGTCG
ATGCTGCCCG AATTCGATGC GGCGGGCACG CTCGTCGGCG GTTCGCTCAT CCACGGCACC
GCGCGCGACT GGGCGAAGTT CGGCGAGTTC CTGCGCAACA AGGGTTCGGT ACGCGGCGCG
CAGATCATCC CGCGCCAATG GATCGAGTTC ATGGTCACGC CCTCGGCGCG CGAAAGTCAG
TACGGTGCGC AGATCTGGCT GAACCGCTCG CCGACGAGCG GCGATCCCGC CCTGTTCCCC
GAACGCGGCC CGAAGGGCCT GTTCGCCTGC ATCGGCCATC TCGGCCAGTA CGTGCTGGTC
AGCCCGAGCC GGGGCCTTGT AATCGTCCGT CTCGGCAAGA CGCAGGACGA CCGGCTCGAA
CCGGTGCGCG AGCGGCTGGC CGATATCGTG GCGCTTTACC GCTAG
 
Protein sequence
MARRSLSLIL MIALLPAVAG CSRGTNAPDA PPPLSDGALA AVAQSPGVNR EKLARAVDRL 
FDKEADETRA VIVMKNGRIV AERYGEGYHE NTRFVSWSMA KSITGVMIGM LVSDGRLRLD
ETAPVPAWQR PGDPRGEITL RQLLQMRSGL RHSEAIEPVY ESDEVRMLFL DGRDDMARYA
EDQPLEAEPG RRFEYSTATS VILADLAARV LSPANDPESR RHAVAEYLRT RLFEPARMKS
MLPEFDAAGT LVGGSLIHGT ARDWAKFGEF LRNKGSVRGA QIIPRQWIEF MVTPSARESQ
YGAQIWLNRS PTSGDPALFP ERGPKGLFAC IGHLGQYVLV SPSRGLVIVR LGKTQDDRLE
PVRERLADIV ALYR