Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0017 |
Symbol | |
ID | 3916059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 12595 |
End bp | 13257 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640442742 |
Product | TonB-like |
Protein accession | YP_495300 |
Protein GI | 87198043 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATACG CTGACCAACA GATGAGCGGT AACAAGATCA CCGCGCTCAT CATCGTTGCG ATTCTTCATG TCGTCGTCGG CTACGCGCTC GTCACCGGGC TGGCGTACGA GGCGATCAAG AAGGTCAAAG AGGTGACCTC GGCGGTCAAC ATCGAGGAAG AGAAGCCGCC GGAGGAGCCG CCGCCGCCGC CGCCTCCGAA GGAGGATACG CCGCCGCCGC CGATCGTCGC GCCTCCGCCG CCGATCAGCT TCAACGCGCC GGCGCCGCAG GTCCAGACGG TAAACGAAGC TCCCGCGATT CCGGCTCCGC CGGCACCGGT GGCGCTTCCG GCCCCGCCTG CTGCGCCTCC GCCGCCGCGA TTTACCCCCA AGGCTGCAAC GCCGAAGGGT AACCCCGGCA ACTGGGCGAC GTCGAACGAC TACCCATCGC GTGCGCTTCG CGAAGAGCGT GAAGGCACCA CGGGTTTCCG TGTCACGGTC GGACCCGACG GCAAGGTTAC GGACTGCCAG ATCACCAGGT CTTCAGGCAG CCCCGATCTT GACGAGGCGA CTTGCTCGAA CGTCCGCCGC CGCGCGCGCT TTGCGCCCGC GATGGATGGC GAGGGCAACC CGACCACGGG CTCGTATTCG AACTCGATCC GCTGGGTCAT TCCTAAGGAC TGA
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Protein sequence | MAYADQQMSG NKITALIIVA ILHVVVGYAL VTGLAYEAIK KVKEVTSAVN IEEEKPPEEP PPPPPPKEDT PPPPIVAPPP PISFNAPAPQ VQTVNEAPAI PAPPAPVALP APPAAPPPPR FTPKAATPKG NPGNWATSND YPSRALREER EGTTGFRVTV GPDGKVTDCQ ITRSSGSPDL DEATCSNVRR RARFAPAMDG EGNPTTGSYS NSIRWVIPKD
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