Gene Saro_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0015 
Symbol 
ID3916057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp11122 
End bp11610 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content61% 
IMG OID640442740 
Productbiopolymer transport ExbD protein 
Protein accessionYP_495298 
Protein GI87198041 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGACA TCAACACCAC GCCGCTCGTG GACGTGATGC TGGTGCTGCT GATCATCTTC 
CTCATCGCGG TGCCGGTCGC GATCCAGACT ATCGAAAAGC TCAAGGTGCC TGTGTTGCCC
AGCGAGGAAT CGCAGGACAA GGTGGAAAAC CTGATGCTTT CGGTCGTCTC GACCGACGCC
GCCGGCCGCA GCCCGAAGGA ACCTGGATAC GAGGGTTCCT CGCGCACCGG CCAGTGCCGC
GTCTATTTCA ACAACACGAC CCCGGTGGAC AACCAGGAGC TGTACCAGCA GGCTTTCAAT
CGCCTTGATG CGATCGTGAA GCGTGAAGGC GGCGCCGCCA ACATGGACCC CGAGAAGATC
CCCGAAGTCC ACATCCGCGG CGACGTGAAC GTCCCCTGGA AGTGCATCGC CGGTGCGATC
TACAACGTCC AGTCGGCCGG TTACCCGAAG GTCGGCTTCA TCTCGACCCC GGTCGATCCG
AACGGCTAA
 
Protein sequence
MSDINTTPLV DVMLVLLIIF LIAVPVAIQT IEKLKVPVLP SEESQDKVEN LMLSVVSTDA 
AGRSPKEPGY EGSSRTGQCR VYFNNTTPVD NQELYQQAFN RLDAIVKREG GAANMDPEKI
PEVHIRGDVN VPWKCIAGAI YNVQSAGYPK VGFISTPVDP NG