Gene Saro_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0008 
Symbol 
ID3916050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp6244 
End bp7563 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content65% 
IMG OID640442733 
Productsodium:dicarboxylate symporter 
Protein accessionYP_495291 
Protein GI87198034 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCAGGC GCCTTACCCT CTACATCCTG ATCGGCATGC TGCTTGGCAT CGTCGTGGGC 
TATGCCCTGA ACACCGCCTA TCCCAAGGGT GACGAGACGC TCGCCTACAC CGCCGACACG
CTCAAGCTCC TGCCCGACGT GTTCTTGCGC CTGATCAAGA TGATTGTTGC CCCGCTGGTC
CTGGCGACCA TCGTCACCGG CATCGCCAGC ATGGGAGACA GTGCGGCGCT GGGCCGCATC
GGCGGGCGCT CGCTGGCGTG GTTCATCACC TTCAGCTTCG TCTCGATCAG TCTCGGCCTC
TTGCTGGTGA ACCTGCTGCG CCCGGGGGTG GGGCTGGAAC TCACGCCGAC CGGTGAGCTT
GGCGAACTCG CCACCGGCGA CTTCACCTTT CGCCATTTCG TCCTCTCGGT GTTCCCGGCC
AGCCCGATCG AGGCGATGGC CAAGAACGAC ATCCTGCAGG TCCTCGTCTT CTCGCTCTTC
GCCGGCATCG CGCTGTCCGC CGTGGGCGAG AAGGGCGCGC CGCTGGTGCG CGGGGCCGAG
GCGCTGGCGC AAGTCATGCT GACCGTCACC GGCTATGTCA TGCGCTTTGC CCCCTTTGCG
GTTTTCGGCG CGATCTCCTC GGTCATCGCG GTGCGAGGGC TTGGCATCAT CGTCACTTAC
GGCAAGCTCG TCGGTTCGTT CTATCTTGCA ATGCTGATCC TGTGGGTCGT GCTGCTGAGC
GCGGGCGCGA TCTTCCTGCG CGGACGCATC TTCACGCTGA TTCGCTACAT CCGCGAACCG
CTGCTGCTGG CCTATTCGAC CGCGAGCTCG GAAGCCGCGC TGCCCAAGCT GTTCGAGCAG
CTCGACCGGT TCGGCATCCC GCGCCGCATC TCGGGCTTCG TCCTGCCGCT GGGCTACAGC
TTCAATCTCG ACGGCTCGAT GATCTACACC AGCTTCGCCG CGATCTTCAT CGCCCAGGCC
TATGGCATCG AGCTTCCGGT CACGAGCCAG ATTGTCATGC TGCTGACCTT GATGGTCACG
TCCAAGGGCA TTGCCGGCGT CCCGCGCGCC AGCCTCGTCG TGATCGCGGC GACGCTGAAC
CAGTTCGGCC TGCCGGTCGA AGGCATCGCC CTGGTGCTGG GCGTGGACCA TTTCCTCGAC
ATGGGCCGCT CTGCCACCAA CGTCGTGGGC AATGCCGTGG CGACGTCGGT CGTGACCAAG
TGGGAAGGCA TGCTCCAGCC GCCGCTCGAT CCGGACGCGG AACCGTTGCA CGCGCCTTCG
CACACGGCGG CCGATGGCCG CGCCGGGCTC AACCTGGACC CGGCCAACTA CGAGGATTGA
 
Protein sequence
MARRLTLYIL IGMLLGIVVG YALNTAYPKG DETLAYTADT LKLLPDVFLR LIKMIVAPLV 
LATIVTGIAS MGDSAALGRI GGRSLAWFIT FSFVSISLGL LLVNLLRPGV GLELTPTGEL
GELATGDFTF RHFVLSVFPA SPIEAMAKND ILQVLVFSLF AGIALSAVGE KGAPLVRGAE
ALAQVMLTVT GYVMRFAPFA VFGAISSVIA VRGLGIIVTY GKLVGSFYLA MLILWVVLLS
AGAIFLRGRI FTLIRYIREP LLLAYSTASS EAALPKLFEQ LDRFGIPRRI SGFVLPLGYS
FNLDGSMIYT SFAAIFIAQA YGIELPVTSQ IVMLLTLMVT SKGIAGVPRA SLVVIAATLN
QFGLPVEGIA LVLGVDHFLD MGRSATNVVG NAVATSVVTK WEGMLQPPLD PDAEPLHAPS
HTAADGRAGL NLDPANYED